diff options
author | wiz <wiz@pkgsrc.org> | 2019-08-11 13:17:48 +0000 |
---|---|---|
committer | wiz <wiz@pkgsrc.org> | 2019-08-11 13:17:48 +0000 |
commit | 1e1e978e5bfccb88f11007db5a2f7c954c43a094 (patch) | |
tree | 050f3c669fc64c0a0b42ccb845c48008097455c4 /biology | |
parent | b25191da84b54b9852a539f132dd4dfd49755e1e (diff) | |
download | pkgsrc-1e1e978e5bfccb88f11007db5a2f7c954c43a094.tar.gz |
Bump PKGREVISIONs for perl 5.30.0
Diffstat (limited to 'biology')
-rw-r--r-- | biology/bcftools/Makefile | 4 | ||||
-rw-r--r-- | biology/bioperl/Makefile | 4 | ||||
-rw-r--r-- | biology/bodr/Makefile | 4 | ||||
-rw-r--r-- | biology/bwa/Makefile | 4 | ||||
-rw-r--r-- | biology/canu/Makefile | 4 | ||||
-rw-r--r-- | biology/cdhit/Makefile | 4 | ||||
-rw-r--r-- | biology/gnome-chemistry-utils/Makefile | 4 | ||||
-rw-r--r-- | biology/gromacs/Makefile | 4 | ||||
-rw-r--r-- | biology/hisat2/Makefile | 4 | ||||
-rw-r--r-- | biology/htslib/Makefile | 4 | ||||
-rw-r--r-- | biology/mpqc/Makefile | 4 | ||||
-rw-r--r-- | biology/mummer/Makefile | 4 | ||||
-rw-r--r-- | biology/ncbi-blast+/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-ASN1-EntrezGene/Makefile | 4 | ||||
-rw-r--r-- | biology/samtools/Makefile | 4 | ||||
-rw-r--r-- | biology/stacks/Makefile | 4 |
16 files changed, 32 insertions, 32 deletions
diff --git a/biology/bcftools/Makefile b/biology/bcftools/Makefile index 45d28c0a38c..226f9e7aa46 100644 --- a/biology/bcftools/Makefile +++ b/biology/bcftools/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.3 2019/04/25 07:32:37 maya Exp $ +# $NetBSD: Makefile,v 1.4 2019/08/11 13:17:59 wiz Exp $ DISTNAME= bcftools-1.9 -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/} EXTRACT_SUFX= .tar.bz2 diff --git a/biology/bioperl/Makefile b/biology/bioperl/Makefile index 9dc88e0f412..2cd33b418f7 100644 --- a/biology/bioperl/Makefile +++ b/biology/bioperl/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.36 2018/08/22 09:42:59 wiz Exp $ +# $NetBSD: Makefile,v 1.37 2019/08/11 13:17:59 wiz Exp $ DISTNAME= BioPerl-1.007002 PKGNAME= ${DISTNAME:tl} -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology perl5 MASTER_SITES= ${MASTER_SITE_PERL_CPAN:=Bio/} diff --git a/biology/bodr/Makefile b/biology/bodr/Makefile index 2a50fddf87f..17c1c3714da 100644 --- a/biology/bodr/Makefile +++ b/biology/bodr/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.11 2018/08/22 09:42:59 wiz Exp $ +# $NetBSD: Makefile,v 1.12 2019/08/11 13:17:59 wiz Exp $ # DISTNAME= bodr-9 -PKGREVISION= 8 +PKGREVISION= 9 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=bodr/} diff --git a/biology/bwa/Makefile b/biology/bwa/Makefile index efdb04f05e7..27ce3d6578a 100644 --- a/biology/bwa/Makefile +++ b/biology/bwa/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.7 2018/08/22 09:42:59 wiz Exp $ +# $NetBSD: Makefile,v 1.8 2019/08/11 13:17:59 wiz Exp $ DISTNAME= bwa-0.7.17 CATEGORIES= biology -PKGREVISION= 2 +PKGREVISION= 3 GITHUB_TAG= v${PKGVERSION_NOREV} MASTER_SITES= ${MASTER_SITE_GITHUB:=lh3/} diff --git a/biology/canu/Makefile b/biology/canu/Makefile index 060c7d1ba8c..a8a03ebcf03 100644 --- a/biology/canu/Makefile +++ b/biology/canu/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.3 2019/07/01 04:07:57 ryoon Exp $ +# $NetBSD: Makefile,v 1.4 2019/08/11 13:17:59 wiz Exp $ DISTNAME= canu-1.8 -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology java MASTER_SITES= ${MASTER_SITE_GITHUB:=marbl/} GITHUB_TAG= v${PKGVERSION_NOREV} diff --git a/biology/cdhit/Makefile b/biology/cdhit/Makefile index 1424a3307ba..f1d15bb0ffe 100644 --- a/biology/cdhit/Makefile +++ b/biology/cdhit/Makefile @@ -1,11 +1,11 @@ -# $NetBSD: Makefile,v 1.5 2019/01/13 22:06:42 bacon Exp $ +# $NetBSD: Makefile,v 1.6 2019/08/11 13:18:00 wiz Exp $ # ########################################################### # Generated by fbsd2pkg # ########################################################### DISTNAME= cdhit-4.6.4 -PKGREVISION= 2 +PKGREVISION= 3 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=weizhongli/} GITHUB_TAG= V${PKGVERSION_NOREV} diff --git a/biology/gnome-chemistry-utils/Makefile b/biology/gnome-chemistry-utils/Makefile index c99c505a139..050508ce786 100644 --- a/biology/gnome-chemistry-utils/Makefile +++ b/biology/gnome-chemistry-utils/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.39 2019/07/21 22:24:29 wiz Exp $ +# $NetBSD: Makefile,v 1.40 2019/08/11 13:18:00 wiz Exp $ # DISTNAME= gnome-chemistry-utils-0.12.13 -PKGREVISION= 28 +PKGREVISION= 29 CATEGORIES= biology MASTER_SITES= http://download-mirror.savannah.gnu.org/releases/gchemutils/0.12/ EXTRACT_SUFX= .tar.bz2 diff --git a/biology/gromacs/Makefile b/biology/gromacs/Makefile index f06f2deda20..11a84a9d4ed 100644 --- a/biology/gromacs/Makefile +++ b/biology/gromacs/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.17 2018/08/22 09:42:59 wiz Exp $ +# $NetBSD: Makefile,v 1.18 2019/08/11 13:18:00 wiz Exp $ # DISTNAME= gromacs-4.5.5 -PKGREVISION= 7 +PKGREVISION= 8 CATEGORIES= biology MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/ diff --git a/biology/hisat2/Makefile b/biology/hisat2/Makefile index a1fea15b3d3..5ad25210d0f 100644 --- a/biology/hisat2/Makefile +++ b/biology/hisat2/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.2 2019/04/25 07:32:37 maya Exp $ +# $NetBSD: Makefile,v 1.3 2019/08/11 13:18:00 wiz Exp $ DISTNAME= hisat2-2.1.0.23 -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=infphilo/} GITHUB_TAG= 20f333e2cfe7ff4d1362b248912893e2644683d7 diff --git a/biology/htslib/Makefile b/biology/htslib/Makefile index 17a9b8f3fb3..0e712fb5356 100644 --- a/biology/htslib/Makefile +++ b/biology/htslib/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.7 2019/07/20 22:46:10 wiz Exp $ +# $NetBSD: Makefile,v 1.8 2019/08/11 13:18:00 wiz Exp $ DISTNAME= htslib-1.9 -PKGREVISION= 3 +PKGREVISION= 4 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/} EXTRACT_SUFX= .tar.bz2 diff --git a/biology/mpqc/Makefile b/biology/mpqc/Makefile index 3230981ee34..bf6d7574692 100644 --- a/biology/mpqc/Makefile +++ b/biology/mpqc/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.14 2018/08/22 09:42:59 wiz Exp $ +# $NetBSD: Makefile,v 1.15 2019/08/11 13:18:00 wiz Exp $ DISTNAME= mpqc-2.3.1 -PKGREVISION= 7 +PKGREVISION= 8 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=mpqc/} EXTRACT_SUFX= .tar.bz2 diff --git a/biology/mummer/Makefile b/biology/mummer/Makefile index fe54517afc1..79617a68c37 100644 --- a/biology/mummer/Makefile +++ b/biology/mummer/Makefile @@ -1,9 +1,9 @@ -# $NetBSD: Makefile,v 1.25 2018/08/22 09:42:59 wiz Exp $ +# $NetBSD: Makefile,v 1.26 2019/08/11 13:18:00 wiz Exp $ # DISTNAME= MUMmer3.20 PKGNAME= mummer-3.20 -PKGREVISION= 6 +PKGREVISION= 7 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=mummer/} diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile index 0642cbdb1f5..f92396e7bb6 100644 --- a/biology/ncbi-blast+/Makefile +++ b/biology/ncbi-blast+/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.10 2019/07/20 22:46:10 wiz Exp $ +# $NetBSD: Makefile,v 1.11 2019/08/11 13:18:00 wiz Exp $ DISTNAME= ncbi-blast-2.8.1+-src PKGNAME= ${DISTNAME:S/+-src//:S/blast/blast+/} -PKGREVISION= 4 +PKGREVISION= 5 CATEGORIES= biology MASTER_SITES= https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ \ https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${PKGVERSION_NOREV}/ diff --git a/biology/p5-Bio-ASN1-EntrezGene/Makefile b/biology/p5-Bio-ASN1-EntrezGene/Makefile index da73c7dde6a..d51ab6b6f79 100644 --- a/biology/p5-Bio-ASN1-EntrezGene/Makefile +++ b/biology/p5-Bio-ASN1-EntrezGene/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.8 2019/06/30 20:14:14 nia Exp $ +# $NetBSD: Makefile,v 1.9 2019/08/11 13:18:01 wiz Exp $ DISTNAME= Bio-ASN1-EntrezGene-1.72 PKGNAME= p5-${DISTNAME} -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology perl5 MASTER_SITES= ${MASTER_SITE_PERL_CPAN:=Bio/} diff --git a/biology/samtools/Makefile b/biology/samtools/Makefile index d82a860333a..b6cdf658fb9 100644 --- a/biology/samtools/Makefile +++ b/biology/samtools/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.5 2019/04/25 07:32:37 maya Exp $ +# $NetBSD: Makefile,v 1.6 2019/08/11 13:18:01 wiz Exp $ DISTNAME= samtools-1.9 -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/} EXTRACT_SUFX= .tar.bz2 diff --git a/biology/stacks/Makefile b/biology/stacks/Makefile index 6ddb4192131..b4b7aea771e 100644 --- a/biology/stacks/Makefile +++ b/biology/stacks/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.2 2019/04/25 07:32:37 maya Exp $ +# $NetBSD: Makefile,v 1.3 2019/08/11 13:18:01 wiz Exp $ DISTNAME= stacks-2.2 -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology MASTER_SITES= http://catchenlab.life.illinois.edu/stacks/source/ |