diff options
author | wiz <wiz@pkgsrc.org> | 2018-08-22 09:42:51 +0000 |
---|---|---|
committer | wiz <wiz@pkgsrc.org> | 2018-08-22 09:42:51 +0000 |
commit | 7da3396fbc255a2e05a47f1ec8d0d4651809b018 (patch) | |
tree | a850c34dd49b5e6bde60c6e0b6280637f411e838 /biology | |
parent | eabc5364f14ce27ce590642bd937cf2a5d1a56c1 (diff) | |
download | pkgsrc-7da3396fbc255a2e05a47f1ec8d0d4651809b018.tar.gz |
Recursive bump for perl5-5.28.0
Diffstat (limited to 'biology')
-rw-r--r-- | biology/bioperl/Makefile | 3 | ||||
-rw-r--r-- | biology/bodr/Makefile | 4 | ||||
-rw-r--r-- | biology/bwa/Makefile | 4 | ||||
-rw-r--r-- | biology/cdhit/Makefile | 4 | ||||
-rw-r--r-- | biology/gnome-chemistry-utils/Makefile | 4 | ||||
-rw-r--r-- | biology/gromacs/Makefile | 4 | ||||
-rw-r--r-- | biology/htslib/Makefile | 3 | ||||
-rw-r--r-- | biology/mpqc/Makefile | 4 | ||||
-rw-r--r-- | biology/mummer/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-ASN1-EntrezGene/Makefile | 3 | ||||
-rw-r--r-- | biology/samtools/Makefile | 3 |
11 files changed, 22 insertions, 18 deletions
diff --git a/biology/bioperl/Makefile b/biology/bioperl/Makefile index 153724b8e92..9dc88e0f412 100644 --- a/biology/bioperl/Makefile +++ b/biology/bioperl/Makefile @@ -1,7 +1,8 @@ -# $NetBSD: Makefile,v 1.35 2017/09/17 07:48:11 wiz Exp $ +# $NetBSD: Makefile,v 1.36 2018/08/22 09:42:59 wiz Exp $ DISTNAME= BioPerl-1.007002 PKGNAME= ${DISTNAME:tl} +PKGREVISION= 1 CATEGORIES= biology perl5 MASTER_SITES= ${MASTER_SITE_PERL_CPAN:=Bio/} diff --git a/biology/bodr/Makefile b/biology/bodr/Makefile index 5e44d8b1c57..2a50fddf87f 100644 --- a/biology/bodr/Makefile +++ b/biology/bodr/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.10 2017/08/01 17:40:08 wiz Exp $ +# $NetBSD: Makefile,v 1.11 2018/08/22 09:42:59 wiz Exp $ # DISTNAME= bodr-9 -PKGREVISION= 7 +PKGREVISION= 8 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=bodr/} diff --git a/biology/bwa/Makefile b/biology/bwa/Makefile index b382e4a148d..efdb04f05e7 100644 --- a/biology/bwa/Makefile +++ b/biology/bwa/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.6 2017/12/27 23:44:01 he Exp $ +# $NetBSD: Makefile,v 1.7 2018/08/22 09:42:59 wiz Exp $ DISTNAME= bwa-0.7.17 CATEGORIES= biology -PKGREVISION= 1 +PKGREVISION= 2 GITHUB_TAG= v${PKGVERSION_NOREV} MASTER_SITES= ${MASTER_SITE_GITHUB:=lh3/} diff --git a/biology/cdhit/Makefile b/biology/cdhit/Makefile index a851d1f2d04..d918b08d91f 100644 --- a/biology/cdhit/Makefile +++ b/biology/cdhit/Makefile @@ -1,11 +1,11 @@ -# $NetBSD: Makefile,v 1.3 2018/07/04 13:40:09 jperkin Exp $ +# $NetBSD: Makefile,v 1.4 2018/08/22 09:42:59 wiz Exp $ # ########################################################### # Generated by fbsd2pkg # ########################################################### DISTNAME= cdhit-4.6.4 -PKGREVISION= 1 +PKGREVISION= 2 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=weizhongli/} GITHUB_TAG= V${PKGVERSION_NOREV} diff --git a/biology/gnome-chemistry-utils/Makefile b/biology/gnome-chemistry-utils/Makefile index b0a3764f26f..c320652d055 100644 --- a/biology/gnome-chemistry-utils/Makefile +++ b/biology/gnome-chemistry-utils/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.35 2018/04/16 14:34:10 wiz Exp $ +# $NetBSD: Makefile,v 1.36 2018/08/22 09:42:59 wiz Exp $ # DISTNAME= gnome-chemistry-utils-0.12.13 -PKGREVISION= 24 +PKGREVISION= 25 CATEGORIES= biology MASTER_SITES= http://download-mirror.savannah.gnu.org/releases/gchemutils/0.12/ EXTRACT_SUFX= .tar.bz2 diff --git a/biology/gromacs/Makefile b/biology/gromacs/Makefile index 3f3682a1a05..f06f2deda20 100644 --- a/biology/gromacs/Makefile +++ b/biology/gromacs/Makefile @@ -1,8 +1,8 @@ -# $NetBSD: Makefile,v 1.16 2016/07/09 06:37:51 wiz Exp $ +# $NetBSD: Makefile,v 1.17 2018/08/22 09:42:59 wiz Exp $ # DISTNAME= gromacs-4.5.5 -PKGREVISION= 6 +PKGREVISION= 7 CATEGORIES= biology MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/ diff --git a/biology/htslib/Makefile b/biology/htslib/Makefile index 2c20fc95652..8f2694c732e 100644 --- a/biology/htslib/Makefile +++ b/biology/htslib/Makefile @@ -1,6 +1,7 @@ -# $NetBSD: Makefile,v 1.2 2018/07/04 13:40:09 jperkin Exp $ +# $NetBSD: Makefile,v 1.3 2018/08/22 09:42:59 wiz Exp $ DISTNAME= htslib-1.8 +PKGREVISION= 1 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/} GITHUB_PROJECT= htslib diff --git a/biology/mpqc/Makefile b/biology/mpqc/Makefile index ab45735bb19..3230981ee34 100644 --- a/biology/mpqc/Makefile +++ b/biology/mpqc/Makefile @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.13 2018/01/01 01:16:43 rillig Exp $ +# $NetBSD: Makefile,v 1.14 2018/08/22 09:42:59 wiz Exp $ DISTNAME= mpqc-2.3.1 -PKGREVISION= 6 +PKGREVISION= 7 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=mpqc/} EXTRACT_SUFX= .tar.bz2 diff --git a/biology/mummer/Makefile b/biology/mummer/Makefile index d4df8cdfe05..fe54517afc1 100644 --- a/biology/mummer/Makefile +++ b/biology/mummer/Makefile @@ -1,9 +1,9 @@ -# $NetBSD: Makefile,v 1.24 2016/07/09 06:37:51 wiz Exp $ +# $NetBSD: Makefile,v 1.25 2018/08/22 09:42:59 wiz Exp $ # DISTNAME= MUMmer3.20 PKGNAME= mummer-3.20 -PKGREVISION= 5 +PKGREVISION= 6 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=mummer/} diff --git a/biology/p5-Bio-ASN1-EntrezGene/Makefile b/biology/p5-Bio-ASN1-EntrezGene/Makefile index b7b821b7c7a..0a2ee77d838 100644 --- a/biology/p5-Bio-ASN1-EntrezGene/Makefile +++ b/biology/p5-Bio-ASN1-EntrezGene/Makefile @@ -1,7 +1,8 @@ -# $NetBSD: Makefile,v 1.6 2017/09/17 07:51:04 wiz Exp $ +# $NetBSD: Makefile,v 1.7 2018/08/22 09:42:59 wiz Exp $ DISTNAME= Bio-ASN1-EntrezGene-1.72 PKGNAME= p5-${DISTNAME} +PKGREVISION= 1 CATEGORIES= biology perl5 MASTER_SITES= ${MASTER_SITE_PERL_CPAN:=Bio/} diff --git a/biology/samtools/Makefile b/biology/samtools/Makefile index 3ea284938cf..acb712e98a9 100644 --- a/biology/samtools/Makefile +++ b/biology/samtools/Makefile @@ -1,6 +1,7 @@ -# $NetBSD: Makefile,v 1.1 2018/05/07 18:37:31 bacon Exp $ +# $NetBSD: Makefile,v 1.2 2018/08/22 09:42:59 wiz Exp $ DISTNAME= samtools-1.8 +PKGREVISION= 1 CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/} GITHUB_TAG= ${PKGVERSION_NOREV} |