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authoradam <adam@pkgsrc.org>2022-11-23 16:18:32 +0000
committeradam <adam@pkgsrc.org>2022-11-23 16:18:32 +0000
commitc4a3e052e2a4449eb2a3f616c79131d185e6f6ee (patch)
treeaa11122615289b26a603d8cc8dc8954329859f08 /biology
parent71596667b607c939aee60c15d4c4282addbf2e8d (diff)
downloadpkgsrc-c4a3e052e2a4449eb2a3f616c79131d185e6f6ee.tar.gz
massive revision bump after textproc/icu update
Diffstat (limited to 'biology')
-rw-r--r--biology/bodr/Makefile4
-rw-r--r--biology/gnome-chemistry-utils/Makefile4
-rw-r--r--biology/gromacs/Makefile4
-rw-r--r--biology/molsketch/Makefile3
-rw-r--r--biology/ncbi-blast+/Makefile4
-rw-r--r--biology/openbabel/Makefile4
-rw-r--r--biology/openbabel/buildlink3.mk4
7 files changed, 14 insertions, 13 deletions
diff --git a/biology/bodr/Makefile b/biology/bodr/Makefile
index e38f3af4416..563e628a82f 100644
--- a/biology/bodr/Makefile
+++ b/biology/bodr/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.20 2022/06/28 11:30:59 wiz Exp $
+# $NetBSD: Makefile,v 1.21 2022/11/23 16:19:24 adam Exp $
#
DISTNAME= bodr-9
-PKGREVISION= 17
+PKGREVISION= 18
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=bodr/}
diff --git a/biology/gnome-chemistry-utils/Makefile b/biology/gnome-chemistry-utils/Makefile
index f5787e39716..41693957087 100644
--- a/biology/gnome-chemistry-utils/Makefile
+++ b/biology/gnome-chemistry-utils/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.57 2022/08/11 05:08:05 gutteridge Exp $
+# $NetBSD: Makefile,v 1.58 2022/11/23 16:19:24 adam Exp $
#
DISTNAME= gnome-chemistry-utils-0.14.16
-PKGREVISION= 10
+PKGREVISION= 11
CATEGORIES= biology
MASTER_SITES= http://download-mirror.savannah.gnu.org/releases/gchemutils/0.14/
EXTRACT_SUFX= .tar.bz2
diff --git a/biology/gromacs/Makefile b/biology/gromacs/Makefile
index ff65c18107e..1ebf4df53a9 100644
--- a/biology/gromacs/Makefile
+++ b/biology/gromacs/Makefile
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.28 2022/06/28 11:31:00 wiz Exp $
+# $NetBSD: Makefile,v 1.29 2022/11/23 16:19:25 adam Exp $
DISTNAME= gromacs-4.5.5
-PKGREVISION= 17
+PKGREVISION= 18
CATEGORIES= biology
MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/
diff --git a/biology/molsketch/Makefile b/biology/molsketch/Makefile
index dcb4c3ae3a3..b2a345d6fb9 100644
--- a/biology/molsketch/Makefile
+++ b/biology/molsketch/Makefile
@@ -1,7 +1,8 @@
-# $NetBSD: Makefile,v 1.8 2022/10/18 18:26:01 pin Exp $
+# $NetBSD: Makefile,v 1.9 2022/11/23 16:19:25 adam Exp $
DISTNAME= Molsketch-0.7.3-src
PKGNAME= ${DISTNAME:S/-src//:tl}
+PKGREVISION= 1
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=molsketch/}
diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile
index 51627d8bb4a..b6df90e55a8 100644
--- a/biology/ncbi-blast+/Makefile
+++ b/biology/ncbi-blast+/Makefile
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.32 2022/10/26 10:31:14 wiz Exp $
+# $NetBSD: Makefile,v 1.33 2022/11/23 16:19:25 adam Exp $
DISTNAME= ncbi-blast-2.13.0+-src
PKGNAME= ${DISTNAME:S/+-src//:S/blast/blast+/}
-PKGREVISION= 4
+PKGREVISION= 5
CATEGORIES= biology
MASTER_SITES= https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ \
https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${PKGVERSION_NOREV}/
diff --git a/biology/openbabel/Makefile b/biology/openbabel/Makefile
index e09fd18068f..e512c98bc9c 100644
--- a/biology/openbabel/Makefile
+++ b/biology/openbabel/Makefile
@@ -1,9 +1,9 @@
-# $NetBSD: Makefile,v 1.52 2022/04/18 19:09:41 adam Exp $
+# $NetBSD: Makefile,v 1.53 2022/11/23 16:18:33 adam Exp $
#
GITHUB_PROJECT= openbabel
DISTNAME= openbabel-${RELVERSION:S/-/./g}
-PKGREVISION= 11
+PKGREVISION= 12
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=openbabel/}
GITHUB_TAG= ${PKGBASE}-${RELVERSION}
diff --git a/biology/openbabel/buildlink3.mk b/biology/openbabel/buildlink3.mk
index e1d1a146127..3f3b63cf464 100644
--- a/biology/openbabel/buildlink3.mk
+++ b/biology/openbabel/buildlink3.mk
@@ -1,4 +1,4 @@
-# $NetBSD: buildlink3.mk,v 1.12 2022/04/18 19:09:41 adam Exp $
+# $NetBSD: buildlink3.mk,v 1.13 2022/11/23 16:18:33 adam Exp $
BUILDLINK_TREE+= openbabel
@@ -6,7 +6,7 @@ BUILDLINK_TREE+= openbabel
OPENBABEL_BUILDLINK3_MK:=
BUILDLINK_API_DEPENDS.openbabel+= openbabel>=3.0.0nb1
-BUILDLINK_ABI_DEPENDS.openbabel?= openbabel>=3.1.1nb11
+BUILDLINK_ABI_DEPENDS.openbabel?= openbabel>=3.1.1nb12
BUILDLINK_PKGSRCDIR.openbabel?= ../../biology/openbabel
.include "../../graphics/cairo/buildlink3.mk"