diff options
| author | mef <mef> | 2015-01-31 06:18:42 +0000 |
|---|---|---|
| committer | mef <mef> | 2015-01-31 06:18:42 +0000 |
| commit | d59b4cdfb4835c12ecfcc7365363ac5bfe44031d (patch) | |
| tree | 837a87554554e6bfa52f2e77548026cde8f1a746 /biology | |
| parent | 841337f4331723ab5a4cdbb651097425de84191f (diff) | |
| download | pkgsrc-d59b4cdfb4835c12ecfcc7365363ac5bfe44031d.tar.gz | |
Update 2.2.3 to 2.3.6
---------------------
ChangeLog unknown.
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/primer3/Makefile | 8 | ||||
| -rw-r--r-- | biology/primer3/distinfo | 10 | ||||
| -rw-r--r-- | biology/primer3/patches/patch-src_primer3__boulder__main.c | 10 |
3 files changed, 15 insertions, 13 deletions
diff --git a/biology/primer3/Makefile b/biology/primer3/Makefile index c08a9f2811a..5abe56bcf5e 100644 --- a/biology/primer3/Makefile +++ b/biology/primer3/Makefile @@ -1,9 +1,10 @@ -# $NetBSD: Makefile,v 1.2 2012/09/11 20:32:13 asau Exp $ +# $NetBSD: Makefile,v 1.3 2015/01/31 06:18:42 mef Exp $ # -VERS= 2.2.3 +VERS= 2.3.6 -DISTNAME= primer3-${VERS} +DISTNAME= primer3-src-${VERS} +PKGNAME= ${DISTNAME:S/-src//} CATEGORIES= biology MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=primer3/} @@ -12,6 +13,7 @@ HOMEPAGE= http://primer3.sourceforge.net/ COMMENT= Design PCR primers LICENSE= gnu-gpl-v2 +WRKSRC= ${WRKDIR}/${PKGNAME} USE_LANGUAGES= c c++ USE_TOOLS+= gmake BUILD_DIRS= src diff --git a/biology/primer3/distinfo b/biology/primer3/distinfo index b19efd7245f..e45c138611a 100644 --- a/biology/primer3/distinfo +++ b/biology/primer3/distinfo @@ -1,6 +1,6 @@ -$NetBSD: distinfo,v 1.1.1.1 2011/10/31 21:25:57 brook Exp $ +$NetBSD: distinfo,v 1.2 2015/01/31 06:18:42 mef Exp $ -SHA1 (primer3-2.2.3.tar.gz) = 20c6a00455b86a5712c1e297930f2624fca45881 -RMD160 (primer3-2.2.3.tar.gz) = 040b41649f5bfc17214502b2ba5e98d1a5afd73f -Size (primer3-2.2.3.tar.gz) = 2284282 bytes -SHA1 (patch-src_primer3__boulder__main.c) = a9228eb3f8f1969a6bc332f828db2def7cf00005 +SHA1 (primer3-src-2.3.6.tar.gz) = 7dbd33a4e9c2a4fe06c74d6b83f8ff0f9ed1c49a +RMD160 (primer3-src-2.3.6.tar.gz) = 1cd48d0677303efd5ca0ce76ac46c04fd5f29b9c +Size (primer3-src-2.3.6.tar.gz) = 1667573 bytes +SHA1 (patch-src_primer3__boulder__main.c) = b99c0aa87d4e6282200d72c502c9c938f6ea2b76 diff --git a/biology/primer3/patches/patch-src_primer3__boulder__main.c b/biology/primer3/patches/patch-src_primer3__boulder__main.c index 61d0bacbbd4..d2f69d10f7e 100644 --- a/biology/primer3/patches/patch-src_primer3__boulder__main.c +++ b/biology/primer3/patches/patch-src_primer3__boulder__main.c @@ -1,11 +1,11 @@ -$NetBSD: patch-src_primer3__boulder__main.c,v 1.1.1.1 2011/10/31 21:25:57 brook Exp $ +$NetBSD: patch-src_primer3__boulder__main.c,v 1.2 2015/01/31 06:18:43 mef Exp $ getopt_long_only is not very portable; use getopt_long instead. ---- src/primer3_boulder_main.c.orig 2010-07-08 17:58:25.000000000 +0000 -+++ src/primer3_boulder_main.c -@@ -133,7 +133,7 @@ main(int argc, char *argv[]) - +--- src/primer3_boulder_main.c.orig 2013-10-21 16:49:57.000000000 +0900 ++++ src/primer3_boulder_main.c 2015-01-31 15:12:56.000000000 +0900 +@@ -128,7 +128,7 @@ main(int argc, char *argv[]) + /* Read in the flags provided with the program call */ opterr = 0; - while ((opt = getopt_long_only(argc, argv, "", long_options, &option_index)) != -1) { |