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authorasau <asau>2012-09-11 20:32:10 +0000
committerasau <asau>2012-09-11 20:32:10 +0000
commitee6b18eb26e24f48cb0e8a9f6889cdbf2e1c1a27 (patch)
tree11db026d302f5f3f643266f62f5d8884607f88b5 /biology
parent2be09253493fc4be1bcdb5124aebd3c452d8c8e5 (diff)
downloadpkgsrc-ee6b18eb26e24f48cb0e8a9f6889cdbf2e1c1a27.tar.gz
"user-destdir" is default these days
Diffstat (limited to 'biology')
-rw-r--r--biology/arka/Makefile5
-rw-r--r--biology/azara/Makefile4
-rw-r--r--biology/bioperl/Makefile4
-rw-r--r--biology/bodr/Makefile4
-rw-r--r--biology/chemical-mime-data/Makefile4
-rw-r--r--biology/chemtool/Makefile3
-rw-r--r--biology/clustalw/Makefile3
-rw-r--r--biology/coalesce/Makefile4
-rw-r--r--biology/fastDNAml/Makefile4
-rw-r--r--biology/fluctuate/Makefile4
-rw-r--r--biology/genesplicer/Makefile4
-rw-r--r--biology/glimmer/Makefile4
-rw-r--r--biology/gnome-chemistry-utils/Makefile4
-rw-r--r--biology/gp/Makefile4
-rw-r--r--biology/gromacs/Makefile4
-rw-r--r--biology/hmmer/Makefile3
-rw-r--r--biology/lucy/Makefile3
-rw-r--r--biology/mopac/Makefile4
-rw-r--r--biology/mummer/Makefile4
-rw-r--r--biology/nut/Makefile4
-rw-r--r--biology/openbabel/Makefile4
-rw-r--r--biology/pdbalign/Makefile4
-rw-r--r--biology/phylip/Makefile4
-rw-r--r--biology/primer3/Makefile4
-rw-r--r--biology/profit/Makefile4
-rw-r--r--biology/puzzle/Makefile4
-rw-r--r--biology/py-mol/Makefile4
-rw-r--r--biology/rasmol/Makefile4
-rw-r--r--biology/sewer/Makefile3
-rw-r--r--biology/stride/Makefile4
-rw-r--r--biology/xylem/Makefile3
31 files changed, 31 insertions, 88 deletions
diff --git a/biology/arka/Makefile b/biology/arka/Makefile
index c50ed7679ca..85b645e6063 100644
--- a/biology/arka/Makefile
+++ b/biology/arka/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.12 2011/04/22 13:43:02 obache Exp $
+# $NetBSD: Makefile,v 1.13 2012/09/11 20:32:10 asau Exp $
#
DISTNAME= arka-0.11
@@ -13,9 +13,6 @@ COMMENT= Graphic interface for the programs from the GP package
DEPENDS+= gp-[0-9]*:../../biology/gp
-PKG_DESTDIR_SUPPORT= user-destdir
-
-
CONF_FILES= ${PREFIX}/share/examples/arka/arkarc ${PKG_SYSCONFDIR}/arkarc
CPPFLAGS+= -DARKA_GLOBAL=\"${PKG_SYSCONFDIR}/arkarc\"
CPPFLAGS+= -DARKA_PROGRAMS=\"${PKG_SYSCONFDIR}/arkarc\"
diff --git a/biology/azara/Makefile b/biology/azara/Makefile
index 19463c1216a..fdec11c7799 100644
--- a/biology/azara/Makefile
+++ b/biology/azara/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.9 2011/12/09 14:36:33 drochner Exp $
+# $NetBSD: Makefile,v 1.10 2012/09/11 20:32:10 asau Exp $
#
DISTNAME= azara-2.7-src
@@ -11,8 +11,6 @@ MAINTAINER= mchittur@cs.nmsu.edu
HOMEPAGE= http://www.ccpn.ac.uk/azara/
COMMENT= Programs to process and view NMR data
-PKG_DESTDIR_SUPPORT= user-destdir
-
MAKE_JOBS_SAFE= no
WRKSRC= ${WRKDIR}/azara-2.7
diff --git a/biology/bioperl/Makefile b/biology/bioperl/Makefile
index c02e305a815..e6e57a5f77b 100644
--- a/biology/bioperl/Makefile
+++ b/biology/bioperl/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.21 2011/08/14 07:27:39 obache Exp $
+# $NetBSD: Makefile,v 1.22 2012/09/11 20:32:10 asau Exp $
#
DISTNAME= bioperl-0.7.0
@@ -10,8 +10,6 @@ MAINTAINER= pkgsrc-users@NetBSD.org
HOMEPAGE= http://bioperl.org/
COMMENT= Perl tools for computational molecular biology
-PKG_DESTDIR_SUPPORT= user-destdir
-
USE_TOOLS+= pax
REPLACE_PERL+= Bio/LiveSeq/Chain.pm
diff --git a/biology/bodr/Makefile b/biology/bodr/Makefile
index b99707ee73e..f4f26442d87 100644
--- a/biology/bodr/Makefile
+++ b/biology/bodr/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.2 2012/06/14 07:44:44 sbd Exp $
+# $NetBSD: Makefile,v 1.3 2012/09/11 20:32:11 asau Exp $
#
DISTNAME= bodr-9
@@ -11,8 +11,6 @@ HOMEPAGE= http://blueobelisk.org/
COMMENT= Blue Obelisk Data Repository
LICENSE= mit
-PKG_DESTDIR_SUPPORT= user-destdir
-
GNU_CONFIGURE= yes
USE_TOOLS+= pkg-config gmake perl
USE_LANGUAGES= # none
diff --git a/biology/chemical-mime-data/Makefile b/biology/chemical-mime-data/Makefile
index 2b4c1f29ab7..3b320c02127 100644
--- a/biology/chemical-mime-data/Makefile
+++ b/biology/chemical-mime-data/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.1.1.1 2011/10/05 22:10:56 ryoon Exp $
+# $NetBSD: Makefile,v 1.2 2012/09/11 20:32:11 asau Exp $
#
DISTNAME= chemical-mime-data-0.1.94
@@ -10,8 +10,6 @@ HOMEPAGE= http://chemical-mime.sourceforge.net/
COMMENT= Chemical mime and file type support for desktops
LICENSE= gnu-lgpl-v2.1 # or later
-PKG_DESTDIR_SUPPORT= user-destdir
-
BUILD_DEPENDS+= ImageMagick-[0-9]*:../../graphics/ImageMagick
BUILD_DEPENDS+= libxslt-[0-9]*:../../textproc/libxslt
diff --git a/biology/chemtool/Makefile b/biology/chemtool/Makefile
index 285d75789d9..f08b7fb9ff3 100644
--- a/biology/chemtool/Makefile
+++ b/biology/chemtool/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.38 2012/09/07 19:16:13 adam Exp $
+# $NetBSD: Makefile,v 1.39 2012/09/11 20:32:11 asau Exp $
DISTNAME= chemtool-1.6.13
PKGREVISION= 3
@@ -10,7 +10,6 @@ HOMEPAGE= http://ruby.chemie.uni-freiburg.de/~martin/chemtool/
COMMENT= Program for drawing organic molecules
PKG_INSTALLATION_TYPES= overwrite pkgviews
-PKG_DESTDIR_SUPPORT= user-destdir
USE_PKGLOCALEDIR= yes
USE_TOOLS+= gmake pkg-config
diff --git a/biology/clustalw/Makefile b/biology/clustalw/Makefile
index 220ee238e19..4899a7c60ab 100644
--- a/biology/clustalw/Makefile
+++ b/biology/clustalw/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.11 2008/03/03 01:10:05 jlam Exp $
+# $NetBSD: Makefile,v 1.12 2012/09/11 20:32:11 asau Exp $
DISTNAME= clustalw1.83.UNIX
PKGNAME= clustalw-1.83
@@ -11,7 +11,6 @@ HOMEPAGE= http://bips.u-strasbg.fr/fr/Documentation/ClustalW/
COMMENT= General purpose multiple alignment program for DNA or proteins
PKG_INSTALLATION_TYPES= overwrite pkgviews
-PKG_DESTDIR_SUPPORT= user-destdir
MAKE_FILE= makefile
BUILD_TARGET= clustalw
diff --git a/biology/coalesce/Makefile b/biology/coalesce/Makefile
index a98c1015562..65a021570bf 100644
--- a/biology/coalesce/Makefile
+++ b/biology/coalesce/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.8 2009/05/16 22:15:57 zafer Exp $
+# $NetBSD: Makefile,v 1.9 2012/09/11 20:32:11 asau Exp $
#
DISTNAME= coalesce1.5b
@@ -10,8 +10,6 @@ MAINTAINER= brook@nmsu.edu
HOMEPAGE= http://evolution.genetics.washington.edu/lamarc/coalesce.html
COMMENT= Estimates effective population size and mutation rate
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}/coalesce1.5beta
BUILD_TARGET= coalesce
diff --git a/biology/fastDNAml/Makefile b/biology/fastDNAml/Makefile
index 4e80c773e7a..16c65cf965e 100644
--- a/biology/fastDNAml/Makefile
+++ b/biology/fastDNAml/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.9 2008/03/03 01:10:05 jlam Exp $
+# $NetBSD: Makefile,v 1.10 2012/09/11 20:32:12 asau Exp $
DISTNAME= fastDNAml_1.2.2
PKGNAME= fastDNAml-1.2.2
@@ -9,8 +9,6 @@ MAINTAINER= babafou@babafou.eu.org
HOMEPAGE= http://geta.life.uiuc.edu/~gary/programs/fastDNAml.html
COMMENT= Program derived from Joseph Felsenstein's version 3.3 DNAML
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}/${DISTNAME}/source
INSTALLATION_DIRS= bin
diff --git a/biology/fluctuate/Makefile b/biology/fluctuate/Makefile
index 4e608478835..e540a265b39 100644
--- a/biology/fluctuate/Makefile
+++ b/biology/fluctuate/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.8 2008/03/03 01:10:05 jlam Exp $
+# $NetBSD: Makefile,v 1.9 2012/09/11 20:32:12 asau Exp $
#
DISTNAME= fluctuate1.4.src.doc
@@ -10,8 +10,6 @@ MAINTAINER= brook@nmsu.edu
HOMEPAGE= http://evolution.genetics.washington.edu/lamarc/fluctuate.html
COMMENT= Estimation of population growth rate
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}/fluctuate1.4
BUILD_TARGET= fluctuate
diff --git a/biology/genesplicer/Makefile b/biology/genesplicer/Makefile
index c59e199d035..53c1f335cea 100644
--- a/biology/genesplicer/Makefile
+++ b/biology/genesplicer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.11 2008/05/26 02:13:16 joerg Exp $
+# $NetBSD: Makefile,v 1.12 2012/09/11 20:32:12 asau Exp $
#
DISTNAME= GeneSplicer
@@ -10,8 +10,6 @@ MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= ftp://ftp.tigr.org/pub/software/GeneSplicer/
COMMENT= Computational Method for Splice Site Prediction
-PKG_DESTDIR_SUPPORT= user-destdir
-
USE_LANGUAGES= c c++
USE_TOOLS+= pax
diff --git a/biology/glimmer/Makefile b/biology/glimmer/Makefile
index 4a532ff2c11..a3ac0a1f484 100644
--- a/biology/glimmer/Makefile
+++ b/biology/glimmer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.10 2008/03/03 01:10:06 jlam Exp $
+# $NetBSD: Makefile,v 1.11 2012/09/11 20:32:12 asau Exp $
#
DISTNAME= glimmer213
@@ -10,8 +10,6 @@ MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= ftp://ftp.tigr.org/pub/software/Glimmer/
COMMENT= System for finding genes in microbial DNA
-PKG_DESTDIR_SUPPORT= user-destdir
-
USE_LANGUAGES= c c++
WRKSRC= ${WRKDIR}/glimmer2.13
diff --git a/biology/gnome-chemistry-utils/Makefile b/biology/gnome-chemistry-utils/Makefile
index 3494d1c36e3..a4f6190db99 100644
--- a/biology/gnome-chemistry-utils/Makefile
+++ b/biology/gnome-chemistry-utils/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.11 2012/09/07 19:16:13 adam Exp $
+# $NetBSD: Makefile,v 1.12 2012/09/11 20:32:12 asau Exp $
#
DISTNAME= gnome-chemistry-utils-0.12.13
@@ -12,8 +12,6 @@ HOMEPAGE= http://gchemutils.nongnu.org/
COMMENT= GChemPaint, a 2D chemical editor and other programs
LICENSE= gnu-gpl-v2 AND gnu-fdl-v1.1
-PKG_DESTDIR_SUPPORT= user-destdir
-
GNU_CONFIGURE= yes
USE_LIBTOOL= yes
USE_TOOLS+= gmake intltool pkg-config msgfmt xgettext msgmerge perl
diff --git a/biology/gp/Makefile b/biology/gp/Makefile
index 7bac9653c3a..0f43601c1f3 100644
--- a/biology/gp/Makefile
+++ b/biology/gp/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.7 2009/07/08 15:14:44 joerg Exp $
+# $NetBSD: Makefile,v 1.8 2012/09/11 20:32:12 asau Exp $
#
DISTNAME= gp-0.26
@@ -10,8 +10,6 @@ MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= http://www.bioinformatics.org/genpak/
COMMENT= Manipulate DNA/RNA sequence in a Unix fashion
-PKG_DESTDIR_SUPPORT= user-destdir
-
INSTALLATION_DIRS= bin ${PKGMANDIR}/man1 share/examples
.include "../../mk/bsd.pkg.mk"
diff --git a/biology/gromacs/Makefile b/biology/gromacs/Makefile
index 34b8dee2369..277697a6cbe 100644
--- a/biology/gromacs/Makefile
+++ b/biology/gromacs/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.9 2012/06/14 07:45:27 sbd Exp $
+# $NetBSD: Makefile,v 1.10 2012/09/11 20:32:12 asau Exp $
#
DISTNAME= gromacs-4.5.5
@@ -11,8 +11,6 @@ HOMEPAGE= http://www.gromacs.org/
COMMENT= Molecular dynamics package
LICENSE= gnu-gpl-v2
-PKG_DESTDIR_SUPPORT= user-destdir
-
# Official recommendation is not to use the gcc 4.1.x set of compilers.
GNU_CONFIGURE= yes
diff --git a/biology/hmmer/Makefile b/biology/hmmer/Makefile
index a02dad9a997..59668966d32 100644
--- a/biology/hmmer/Makefile
+++ b/biology/hmmer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.12 2009/07/08 15:20:04 joerg Exp $
+# $NetBSD: Makefile,v 1.13 2012/09/11 20:32:12 asau Exp $
#
DISTNAME= hmmer-2.3.2
@@ -10,7 +10,6 @@ HOMEPAGE= http://hmmer.janelia.org/
COMMENT= Implementation of profile HMM software for protein sequence analysis
PKG_INSTALLATION_TYPES= overwrite pkgviews
-PKG_DESTDIR_SUPPORT= user-destdir
GNU_CONFIGURE= yes
diff --git a/biology/lucy/Makefile b/biology/lucy/Makefile
index 85302e61db7..c1bfc2a92cb 100644
--- a/biology/lucy/Makefile
+++ b/biology/lucy/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.7 2010/09/19 07:13:37 obache Exp $
+# $NetBSD: Makefile,v 1.8 2012/09/11 20:32:13 asau Exp $
#
DISTNAME= ${PKGNAME:S/-//}
@@ -12,7 +12,6 @@ COMMENT= Sequence Cleanup Program
#LICENSE= LICENSE file say "artistic", but bit differ.
PKG_INSTALLATION_TYPES= overwrite pkgviews
-PKG_DESTDIR_SUPPORT= user-destdir
WRKSRC= ${WRKDIR}/${PKGNAME_NOREV}p
diff --git a/biology/mopac/Makefile b/biology/mopac/Makefile
index d2918ed2202..4281972e968 100644
--- a/biology/mopac/Makefile
+++ b/biology/mopac/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.6 2010/07/30 10:36:23 asau Exp $
+# $NetBSD: Makefile,v 1.7 2012/09/11 20:32:13 asau Exp $
#
DISTNAME= mopac7
@@ -17,8 +17,6 @@ MAINTAINER= pkgsrc-users@NetBSD.org
HOMEPAGE= http://server.ccl.net/cca/software/LINUX/mopac7/index.shtml
COMMENT= Molecular energy calculation program
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}/mopac7
BUILD_TARGET= MOPAC7
USE_TOOLS+= gmake pax
diff --git a/biology/mummer/Makefile b/biology/mummer/Makefile
index 04190ef8564..bb583251cf4 100644
--- a/biology/mummer/Makefile
+++ b/biology/mummer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.18 2008/10/11 22:01:13 schwarz Exp $
+# $NetBSD: Makefile,v 1.19 2012/09/11 20:32:13 asau Exp $
#
DISTNAME= MUMmer3.20
@@ -10,8 +10,6 @@ MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= http://mummer.sourceforge.net/
COMMENT= System for aligning whole genome sequences
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}/${DISTNAME}
USE_TOOLS+= csh:run gmake perl:run pax
USE_LANGUAGES= c c++
diff --git a/biology/nut/Makefile b/biology/nut/Makefile
index abb6f6ff54a..4c55f4957e5 100644
--- a/biology/nut/Makefile
+++ b/biology/nut/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.27 2010/09/19 07:52:19 obache Exp $
+# $NetBSD: Makefile,v 1.28 2012/09/11 20:32:13 asau Exp $
DISTNAME= nut-15.8
CATEGORIES= biology
@@ -9,8 +9,6 @@ HOMEPAGE= http://nut.sourceforge.net/
COMMENT= Record what you eat and analyze your meals
LICENSE= gnu-gpl-v2
-PKG_DESTDIR_SUPPORT= user-destdir
-
BUILD_TARGET= nut
USE_TOOLS+= gmake
diff --git a/biology/openbabel/Makefile b/biology/openbabel/Makefile
index a642827e1d9..56eb9d96041 100644
--- a/biology/openbabel/Makefile
+++ b/biology/openbabel/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.7 2012/09/07 19:16:13 adam Exp $
+# $NetBSD: Makefile,v 1.8 2012/09/11 20:32:13 asau Exp $
#
DISTNAME= openbabel-2.3.0
@@ -11,8 +11,6 @@ HOMEPAGE= http://openbabel.org/
COMMENT= Chemistry file translation program
LICENSE= gnu-gpl-v2
-PKG_DESTDIR_SUPPORT= user-destdir
-
USE_LANGUAGES= c c++
USE_CMAKE= yes
diff --git a/biology/pdbalign/Makefile b/biology/pdbalign/Makefile
index a8cfeeafa55..c15e02d83fd 100644
--- a/biology/pdbalign/Makefile
+++ b/biology/pdbalign/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.5 2008/03/03 01:10:06 jlam Exp $
+# $NetBSD: Makefile,v 1.6 2012/09/11 20:32:13 asau Exp $
#
DISTNAME= pdbalign
@@ -10,8 +10,6 @@ MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= #empty
COMMENT= Prediction of Protein Secondary Structure and Active Sites
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}
INSTALLATION_DIRS= bin
diff --git a/biology/phylip/Makefile b/biology/phylip/Makefile
index 690cac2c8ed..cdfbaa7ed46 100644
--- a/biology/phylip/Makefile
+++ b/biology/phylip/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.23 2010/07/10 11:26:32 obache Exp $
+# $NetBSD: Makefile,v 1.24 2012/09/11 20:32:13 asau Exp $
DISTNAME= phylip-3.69
CATEGORIES= biology
@@ -13,8 +13,6 @@ RESTRICTED= Distribution permitted only if no fee is charged.
NO_SRC_ON_CDROM= ${RESTRICTED}
NO_BIN_ON_CDROM= ${RESTRICTED}
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}/${DISTNAME}/src
INSTALLATION_DIRS= bin share/fonts/phylip share/doc/phylip
diff --git a/biology/primer3/Makefile b/biology/primer3/Makefile
index f2a323dc54d..c08a9f2811a 100644
--- a/biology/primer3/Makefile
+++ b/biology/primer3/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.1.1.1 2011/10/31 21:25:57 brook Exp $
+# $NetBSD: Makefile,v 1.2 2012/09/11 20:32:13 asau Exp $
#
VERS= 2.2.3
@@ -12,8 +12,6 @@ HOMEPAGE= http://primer3.sourceforge.net/
COMMENT= Design PCR primers
LICENSE= gnu-gpl-v2
-PKG_DESTDIR_SUPPORT= user-destdir
-
USE_LANGUAGES= c c++
USE_TOOLS+= gmake
BUILD_DIRS= src
diff --git a/biology/profit/Makefile b/biology/profit/Makefile
index 8d47c3df322..2fd53021de8 100644
--- a/biology/profit/Makefile
+++ b/biology/profit/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.11 2008/05/26 02:13:16 joerg Exp $
+# $NetBSD: Makefile,v 1.12 2012/09/11 20:32:13 asau Exp $
#
DISTNAME= ProFitV2.2
@@ -10,8 +10,6 @@ MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= http://acrmwww.biochem.ucl.ac.uk/programs/profit/index.html
COMMENT= Performs least squares fits of two protein structures
-PKG_DESTDIR_SUPPORT= user-destdir
-
USE_TOOLS+= pax
BUILD_TARGET= profit
diff --git a/biology/puzzle/Makefile b/biology/puzzle/Makefile
index 217d11b83b3..1eae97a7d4a 100644
--- a/biology/puzzle/Makefile
+++ b/biology/puzzle/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.12 2010/09/19 08:38:14 obache Exp $
+# $NetBSD: Makefile,v 1.13 2012/09/11 20:32:14 asau Exp $
DISTNAME= tree-puzzle-5.2
PKGNAME= ${DISTNAME:S/^tree-//}
@@ -10,8 +10,6 @@ HOMEPAGE= http://www.tree-puzzle.de/
COMMENT= Maximum likelihood analysis of molecular sequence data
LICENSE= gnu-gpl-v2
-PKG_DESTDIR_SUPPORT= user-destdir
-
GNU_CONFIGURE= yes
INSTALLATION_DIRS= share/doc/puzzle \
diff --git a/biology/py-mol/Makefile b/biology/py-mol/Makefile
index 2d7b3b3bbaa..bea64c8b79b 100644
--- a/biology/py-mol/Makefile
+++ b/biology/py-mol/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.11 2012/04/08 19:08:45 wiz Exp $
+# $NetBSD: Makefile,v 1.12 2012/09/11 20:32:14 asau Exp $
DISTNAME= pymol-v1.4.1
PKGNAME= ${PYPKGPREFIX}-${DISTNAME:S/pymol-v/mol-/}
@@ -17,8 +17,6 @@ USE_TOOLS+= csh:run
DEPENDS+= ${PYPKGPREFIX}-numpy-[0-9]*:../../math/py-numpy
DEPENDS+= ${PYPKGPREFIX}-Pmw-[0-9]*:../../x11/py-Pmw
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}/pymol
CONFLICTS= pymol-[0-9]*
diff --git a/biology/rasmol/Makefile b/biology/rasmol/Makefile
index 39563383016..e9e4c7262ce 100644
--- a/biology/rasmol/Makefile
+++ b/biology/rasmol/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.31 2010/12/30 08:33:47 obache Exp $
+# $NetBSD: Makefile,v 1.32 2012/09/11 20:32:14 asau Exp $
DISTNAME= RasMol_2.7.3
PKGNAME= rasmol-2.7.3
@@ -10,8 +10,6 @@ MAINTAINER= pkgsrc-users@NetBSD.org
HOMEPAGE= http://www.bernstein-plus-sons.com/software/rasmol/
COMMENT= Molecular Graphics Visualisation Tool
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}/${DISTNAME}/src
USE_IMAKE= YES
USE_TOOLS+= gunzip mkdirhier
diff --git a/biology/sewer/Makefile b/biology/sewer/Makefile
index cbbad299fed..a965c22dd4b 100644
--- a/biology/sewer/Makefile
+++ b/biology/sewer/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.8 2009/08/25 11:56:34 wiz Exp $
+# $NetBSD: Makefile,v 1.9 2012/09/11 20:32:14 asau Exp $
DISTNAME= sewer
PKGNAME= sewer-2.6
@@ -12,7 +12,6 @@ HOMEPAGE= http://iubio.bio.indiana.edu/webapps/SeWeR/
COMMENT= SEquence Analysis using WEb Resources
PKG_INSTALLATION_TYPES= overwrite pkgviews
-PKG_DESTDIR_SUPPORT= user-destdir
USE_TOOLS+= pax
diff --git a/biology/stride/Makefile b/biology/stride/Makefile
index 23c6bcafaae..224baf87017 100644
--- a/biology/stride/Makefile
+++ b/biology/stride/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.7 2008/03/03 01:10:06 jlam Exp $
+# $NetBSD: Makefile,v 1.8 2012/09/11 20:32:14 asau Exp $
#
DISTNAME= stride
@@ -10,8 +10,6 @@ MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= http://wolf.bi.umist.ac.uk/unix/stride.html
COMMENT= Protein secondary structure assignment from atomic coordinates
-PKG_DESTDIR_SUPPORT= user-destdir
-
WRKSRC= ${WRKDIR}
INSTALLATION_DIRS= bin
diff --git a/biology/xylem/Makefile b/biology/xylem/Makefile
index 8f1fd27670f..223bb00ab88 100644
--- a/biology/xylem/Makefile
+++ b/biology/xylem/Makefile
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.9 2009/07/16 15:17:22 joerg Exp $
+# $NetBSD: Makefile,v 1.10 2012/09/11 20:32:14 asau Exp $
#
DISTNAME= xylem.1.8.7
@@ -11,7 +11,6 @@ MAINTAINER= hdp@cs.nmsu.edu
HOMEPAGE= http://home.cc.umanitoba.ca/~psgendb/XYLEM.html
COMMENT= Tools for manipulation of genetic databases
-PKG_DESTDIR_SUPPORT= user-destdir
MAKE_JOBS_SAFE= no
WRKSRC= ${WRKDIR}/xylem