update to 1.4.4

relevnt changes:
-Numerous performance changes were made to the HDF5 sequential and
 parallel libraries
-Several corruption problems were fixed.

6 files changed, 19 insertions, 218 deletions

diff --git a/devel/hdf5/Makefile b/devel/hdf5/Makefile
index 1c80c8618aa..c0a2816abe4 100644
--- a/devel/hdf5/Makefile
+++ b/devel/hdf5/Makefile
@@ -1,9 +1,9 @@
-# $NetBSD: Makefile,v 1.14 2002/10/10 09:49:54 wiz Exp $
+# $NetBSD: Makefile,v 1.15 2002/10/28 16:32:01 drochner Exp $
 
-DISTNAME=		hdf5-1.4.3
+DISTNAME=		hdf5-1.4.4
 CATEGORIES=		devel
-MASTER_SITES=		ftp://hdf.ncsa.uiuc.edu/HDF5/hdf5-1.4.3/src/ \
-			ftp://sunsite.doc.ic.ac.uk/packages/HDF/HDF5/hdf5-1.4.3/src/ \
+MASTER_SITES=		ftp://hdf.ncsa.uiuc.edu/HDF5/hdf5-1.4.4/src/ \
+			ftp://sunsite.doc.ic.ac.uk/packages/HDF/HDF5/hdf5-1.4.4/src/ \
 			http://www.go.dlr.de/fresh/unix/src/misc/
 
 MAINTAINER=		packages@netbsd.org
@@ -13,13 +13,11 @@ COMMENT=		Hierarchical Data Format (new generation)
 GNU_CONFIGURE=		# defined
 USE_BUILDLINK2=		# defined
 USE_LIBTOOL=		# defined
-LTCONFIG_OVERRIDE=	${WRKSRC}/bin/ltconfig
-
-CONFIGURE_ENV+=		H5CC_CFLAGS=-I${BUILDLINK_PREFIX.zlib}/include
-CONFIGURE_ENV+=		H5CC_LDFLAGS="-Wl,-R${BUILDLINK_PREFIX.zlib}/lib -L${BUILDLINK_PREFIX.zlib}/lib"
+LIBTOOL_OVERRIDE=	${WRKSRC}/libtool
 
 post-install:
 	${INSTALL_SCRIPT} ${WRKSRC}/tools/misc/h5cc ${PREFIX}/bin
+	${INSTALL_SCRIPT} ${WRKSRC}/tools/misc/h5redeploy.in ${PREFIX}/bin/h5redeploy
 	${INSTALL_DATA_DIR} ${PREFIX}/share/doc/hdf5
 	cd ${WRKSRC} && ${INSTALL_DATA} COPYING release_docs/HISTORY.txt \
 		release_docs/RELEASE.txt ${PREFIX}/share/doc/hdf5
diff --git a/devel/hdf5/PLIST b/devel/hdf5/PLIST
index 8b4b49702ff..b675c2ceb3f 100644
--- a/devel/hdf5/PLIST
+++ b/devel/hdf5/PLIST
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.2 2002/05/03 20:51:33 jtb Exp $
+@comment $NetBSD: PLIST,v 1.3 2002/10/28 16:32:01 drochner Exp $
 bin/gif2h5
 bin/h52gif
 bin/h5cc
@@ -6,6 +6,8 @@ bin/h5debug
 bin/h5dump
 bin/h5import
 bin/h5ls
+bin/h5perf
+bin/h5redeploy
 bin/h5repart
 include/H5ACpublic.h
 include/H5Apublic.h
@@ -74,7 +76,6 @@ share/doc/html/hdf5/Copyright.html
 share/doc/html/hdf5/Datasets.html
 share/doc/html/hdf5/Dataspaces.html
 share/doc/html/hdf5/Datatypes.html
-share/doc/html/hdf5/DatatypesEnum.html
 share/doc/html/hdf5/Debugging.html
 share/doc/html/hdf5/Dependencies
 share/doc/html/hdf5/EnumMap.gif
@@ -174,166 +175,6 @@ share/doc/html/hdf5/TechNotes/pipe4.gif
 share/doc/html/hdf5/TechNotes/pipe5.gif
 share/doc/html/hdf5/TechNotes/version.gif
 share/doc/html/hdf5/Tools.html
-share/doc/html/hdf5/Tutor/Contents.html
-share/doc/html/hdf5/Tutor/ContentsAdd.html
-share/doc/html/hdf5/Tutor/ContentsAdv.html
-share/doc/html/hdf5/Tutor/ContentsFull.html
-share/doc/html/hdf5/Tutor/ContentsIntro.html
-share/doc/html/hdf5/Tutor/Copyright.html
-share/doc/html/hdf5/Tutor/Dependencies
-share/doc/html/hdf5/Tutor/Graphics/AddInfo.gif
-share/doc/html/hdf5/Tutor/Graphics/AdvTopics.gif
-share/doc/html/hdf5/Tutor/Graphics/BLANK.gif
-share/doc/html/hdf5/Tutor/Graphics/ChunkExt.gif
-share/doc/html/hdf5/Tutor/Graphics/CompDTypes.gif
-share/doc/html/hdf5/Tutor/Graphics/Copy.gif
-share/doc/html/hdf5/Tutor/Graphics/CreateAttr.gif
-share/doc/html/hdf5/Tutor/Graphics/CreateDset1.gif
-share/doc/html/hdf5/Tutor/Graphics/CreateDset2.gif
-share/doc/html/hdf5/Tutor/Graphics/CreateFile.gif
-share/doc/html/hdf5/Tutor/Graphics/CreateGrp1.gif
-share/doc/html/hdf5/Tutor/Graphics/CreateGrp2.gif
-share/doc/html/hdf5/Tutor/Graphics/Dependencies
-share/doc/html/hdf5/Tutor/Graphics/Examples.gif
-share/doc/html/hdf5/Tutor/Graphics/FileOrg.gif
-share/doc/html/hdf5/Tutor/Graphics/FullTOC1.gif
-share/doc/html/hdf5/Tutor/Graphics/FullTOC2.gif
-share/doc/html/hdf5/Tutor/Graphics/Glossary.gif
-share/doc/html/hdf5/Tutor/Graphics/H5API.gif
-share/doc/html/hdf5/Tutor/Graphics/Intro.gif
-share/doc/html/hdf5/Tutor/Graphics/IntroTopics.gif
-share/doc/html/hdf5/Tutor/Graphics/Iterate.gif
-share/doc/html/hdf5/Tutor/Graphics/Makefile
-share/doc/html/hdf5/Tutor/Graphics/Makefile.in
-share/doc/html/hdf5/Tutor/Graphics/MountFile.gif
-share/doc/html/hdf5/Tutor/Graphics/Quiz.gif
-share/doc/html/hdf5/Tutor/Graphics/QuizAns.gif
-share/doc/html/hdf5/Tutor/Graphics/RdWrDataset.gif
-share/doc/html/hdf5/Tutor/Graphics/RefObject.gif
-share/doc/html/hdf5/Tutor/Graphics/RefRegion.gif
-share/doc/html/hdf5/Tutor/Graphics/References.gif
-share/doc/html/hdf5/Tutor/Graphics/SelectElemCp.gif
-share/doc/html/hdf5/Tutor/Graphics/SelectHyp.gif
-share/doc/html/hdf5/Tutor/Graphics/TOC.gif
-share/doc/html/hdf5/Tutor/Graphics/TOCFull.gif
-share/doc/html/hdf5/Tutor/Graphics/TOCShort.gif
-share/doc/html/hdf5/Tutor/Graphics/TitlePg.gif
-share/doc/html/hdf5/Tutor/Graphics/Utilities.gif
-share/doc/html/hdf5/Tutor/Makefile
-share/doc/html/hdf5/Tutor/Makefile.in
-share/doc/html/hdf5/Tutor/answers.html
-share/doc/html/hdf5/Tutor/api.html
-share/doc/html/hdf5/Tutor/bighdf2sp.JPG
-share/doc/html/hdf5/Tutor/compound.html
-share/doc/html/hdf5/Tutor/crtatt.html
-share/doc/html/hdf5/Tutor/crtdat.html
-share/doc/html/hdf5/Tutor/crtfile.html
-share/doc/html/hdf5/Tutor/crtgrp.html
-share/doc/html/hdf5/Tutor/crtgrpar.html
-share/doc/html/hdf5/Tutor/crtgrpd.html
-share/doc/html/hdf5/Tutor/examples/Dependencies
-share/doc/html/hdf5/Tutor/examples/Makefile
-share/doc/html/hdf5/Tutor/examples/Makefile.in
-share/doc/html/hdf5/Tutor/examples/attrexample.f90
-share/doc/html/hdf5/Tutor/examples/chunk.f90
-share/doc/html/hdf5/Tutor/examples/compound.f90
-share/doc/html/hdf5/Tutor/examples/dsetexample.f90
-share/doc/html/hdf5/Tutor/examples/fileexample.f90
-share/doc/html/hdf5/Tutor/examples/groupexample.f90
-share/doc/html/hdf5/Tutor/examples/grpdsetexample.f90
-share/doc/html/hdf5/Tutor/examples/grpit.f90
-share/doc/html/hdf5/Tutor/examples/grpsexample.f90
-share/doc/html/hdf5/Tutor/examples/h5_compound.c
-share/doc/html/hdf5/Tutor/examples/h5_copy.c
-share/doc/html/hdf5/Tutor/examples/h5_crtatt.c
-share/doc/html/hdf5/Tutor/examples/h5_crtdat.c
-share/doc/html/hdf5/Tutor/examples/h5_crtfile.c
-share/doc/html/hdf5/Tutor/examples/h5_crtgrp.c
-share/doc/html/hdf5/Tutor/examples/h5_crtgrpar.c
-share/doc/html/hdf5/Tutor/examples/h5_crtgrpd.c
-share/doc/html/hdf5/Tutor/examples/h5_extend.c
-share/doc/html/hdf5/Tutor/examples/h5_hyperslab.c
-share/doc/html/hdf5/Tutor/examples/h5_iterate.c
-share/doc/html/hdf5/Tutor/examples/h5_mount.c
-share/doc/html/hdf5/Tutor/examples/h5_rdwt.c
-share/doc/html/hdf5/Tutor/examples/h5_read.c
-share/doc/html/hdf5/Tutor/examples/h5_ref2obj.c
-share/doc/html/hdf5/Tutor/examples/h5_ref2objr.c
-share/doc/html/hdf5/Tutor/examples/h5_ref2objw.c
-share/doc/html/hdf5/Tutor/examples/h5_ref2reg.c
-share/doc/html/hdf5/Tutor/examples/h5_ref2regr.c
-share/doc/html/hdf5/Tutor/examples/h5_ref2regw.c
-share/doc/html/hdf5/Tutor/examples/h5_reference.c
-share/doc/html/hdf5/Tutor/examples/hyperslab.f90
-share/doc/html/hdf5/Tutor/examples/java/Compound.java
-share/doc/html/hdf5/Tutor/examples/java/Copy.java
-share/doc/html/hdf5/Tutor/examples/java/CreateAttribute.java
-share/doc/html/hdf5/Tutor/examples/java/CreateDataset.java
-share/doc/html/hdf5/Tutor/examples/java/CreateFile.java
-share/doc/html/hdf5/Tutor/examples/java/CreateFileInput.java
-share/doc/html/hdf5/Tutor/examples/java/CreateGroup.java
-share/doc/html/hdf5/Tutor/examples/java/CreateGroupAR.java
-share/doc/html/hdf5/Tutor/examples/java/CreateGroupDataset.java
-share/doc/html/hdf5/Tutor/examples/java/DatasetRdWt.java
-share/doc/html/hdf5/Tutor/examples/java/Dependencies
-share/doc/html/hdf5/Tutor/examples/java/HyperSlab.java
-share/doc/html/hdf5/Tutor/examples/java/Makefile
-share/doc/html/hdf5/Tutor/examples/java/Makefile.in
-share/doc/html/hdf5/Tutor/examples/java/Makefile.in.txt
-share/doc/html/hdf5/Tutor/examples/java/Makefile.txt
-share/doc/html/hdf5/Tutor/examples/java/README
-share/doc/html/hdf5/Tutor/examples/java/readme.html
-share/doc/html/hdf5/Tutor/examples/java/runCompound.sh
-share/doc/html/hdf5/Tutor/examples/java/runCompound.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runCopy.sh
-share/doc/html/hdf5/Tutor/examples/java/runCopy.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runCreateAttribute.sh
-share/doc/html/hdf5/Tutor/examples/java/runCreateAttribute.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runCreateDataset.sh
-share/doc/html/hdf5/Tutor/examples/java/runCreateDataset.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runCreateFile.sh
-share/doc/html/hdf5/Tutor/examples/java/runCreateFile.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runCreateFileInput.sh
-share/doc/html/hdf5/Tutor/examples/java/runCreateFileInput.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runCreateGroup.sh
-share/doc/html/hdf5/Tutor/examples/java/runCreateGroup.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runCreateGroupAR.sh
-share/doc/html/hdf5/Tutor/examples/java/runCreateGroupAR.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runCreateGroupDataset.sh
-share/doc/html/hdf5/Tutor/examples/java/runCreateGroupDataset.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runDatasetRdWt.sh
-share/doc/html/hdf5/Tutor/examples/java/runDatasetRdWt.sh.in
-share/doc/html/hdf5/Tutor/examples/java/runHyperSlab.sh
-share/doc/html/hdf5/Tutor/examples/java/runHyperSlab.sh.in
-share/doc/html/hdf5/Tutor/examples/mountexample.f90
-share/doc/html/hdf5/Tutor/examples/refobjexample.f90
-share/doc/html/hdf5/Tutor/examples/refregexample.f90
-share/doc/html/hdf5/Tutor/examples/rwdsetexample.f90
-share/doc/html/hdf5/Tutor/examples/selectele.f90
-share/doc/html/hdf5/Tutor/extend.html
-share/doc/html/hdf5/Tutor/fileorg.html
-share/doc/html/hdf5/Tutor/footer-ncsalogo.gif
-share/doc/html/hdf5/Tutor/glossary.html
-share/doc/html/hdf5/Tutor/img001.gif
-share/doc/html/hdf5/Tutor/img002.gif
-share/doc/html/hdf5/Tutor/img003.gif
-share/doc/html/hdf5/Tutor/img004.gif
-share/doc/html/hdf5/Tutor/img005.gif
-share/doc/html/hdf5/Tutor/index.html
-share/doc/html/hdf5/Tutor/intro.html
-share/doc/html/hdf5/Tutor/iterate.html
-share/doc/html/hdf5/Tutor/mount.html
-share/doc/html/hdf5/Tutor/property.html
-share/doc/html/hdf5/Tutor/questions.html
-share/doc/html/hdf5/Tutor/rdwt.html
-share/doc/html/hdf5/Tutor/references.html
-share/doc/html/hdf5/Tutor/reftoobj.html
-share/doc/html/hdf5/Tutor/reftoreg.html
-share/doc/html/hdf5/Tutor/select.html
-share/doc/html/hdf5/Tutor/selectc.html
-share/doc/html/hdf5/Tutor/software.html
-share/doc/html/hdf5/Tutor/title.html
-share/doc/html/hdf5/Tutor/util.html
 share/doc/html/hdf5/Version.html
 share/doc/html/hdf5/chunk1.gif
 share/doc/html/hdf5/compat.html
@@ -380,13 +221,10 @@ share/doc/html/hdf5/pipe5.gif
 share/doc/html/hdf5/version.gif
 @dirrm share/doc/html/hdf5/fortran
 @dirrm share/doc/html/hdf5/cpplus
-@dirrm share/doc/html/hdf5/Tutor/examples/java
-@dirrm share/doc/html/hdf5/Tutor/examples
-@dirrm share/doc/html/hdf5/Tutor/Graphics
-@dirrm share/doc/html/hdf5/Tutor
 @dirrm share/doc/html/hdf5/TechNotes
 @dirrm share/doc/html/hdf5/PSandPDF
 @dirrm share/doc/html/hdf5/Intro
 @dirrm share/doc/html/hdf5/Graphics
 @dirrm share/doc/html/hdf5/ADGuide
 @dirrm share/doc/html/hdf5
+@dirrm share/doc/hdf5
diff --git a/devel/hdf5/distinfo b/devel/hdf5/distinfo
index bf0a5ceb3af..6999b281153 100644
--- a/devel/hdf5/distinfo
+++ b/devel/hdf5/distinfo
@@ -1,7 +1,5 @@
-$NetBSD: distinfo,v 1.4 2002/05/03 20:51:33 jtb Exp $
+$NetBSD: distinfo,v 1.5 2002/10/28 16:32:01 drochner Exp $
 
-SHA1 (hdf5-1.4.3.tar.gz) = 9777259603d8c753c6a7a10726dc63afbdfd5688
-Size (hdf5-1.4.3.tar.gz) = 3282122 bytes
-SHA1 (patch-aa) = 35fd7543ccb3dd4088873151b74431788fe7f0f0
-SHA1 (patch-ab) = 7fc0279c8026b2be3a202bbfbc5cb35f6bf8eb0b
-SHA1 (patch-ac) = 50afdf52d3bc22f314c0fcf172c375b07cfb3679
+SHA1 (hdf5-1.4.4.tar.gz) = 8f24c3953c1d3b44f46b7df4b85b5a4d5cda2234
+Size (hdf5-1.4.4.tar.gz) = 2999949 bytes
+SHA1 (patch-aa) = 4f9e284a72a2b4f96eab9d38045f7bee9f7787ab
diff --git a/devel/hdf5/patches/patch-aa b/devel/hdf5/patches/patch-aa
index 25dae6f1e63..1e177f1c393 100644
--- a/devel/hdf5/patches/patch-aa
+++ b/devel/hdf5/patches/patch-aa
@@ -1,12 +1,12 @@
-$NetBSD: patch-aa,v 1.4 2002/05/03 20:51:33 jtb Exp $
+$NetBSD: patch-aa,v 1.5 2002/10/28 16:32:02 drochner Exp $
 
---- tools/misc/Makefile.in.orig	Mon Aug 27 19:41:43 2001
-+++ tools/misc/Makefile.in	Wed May  1 17:47:54 2002
-@@ -26,7 +26,7 @@
+--- tools/misc/Makefile.in.orig	Thu Jun 13 16:02:55 2002
++++ tools/misc/Makefile.in	Mon Oct 28 16:59:36 2002
+@@ -34,7 +34,7 @@
  LIBTOOLS=../lib/libh5tools.la
  LIBHDF5=$(top_builddir)/src/libhdf5.la
  
--PUB_PROGS=h5cc h5debug h5import h5repart @PDB2HDF@
+-PUB_PROGS=h5cc h5debug h5import h5redeploy h5repart @PDB2HDF@
 +PUB_PROGS=h5debug h5import h5repart @PDB2HDF@
  PROGS=$(PUB_PROGS) $(TEST_PROGS)
  
diff --git a/devel/hdf5/patches/patch-ab b/devel/hdf5/patches/patch-ab
deleted file mode 100644
index d91e1395249..00000000000
--- a/devel/hdf5/patches/patch-ab
+++ /dev/null
@@ -1,15 +0,0 @@
-$NetBSD: patch-ab,v 1.1 2002/05/03 20:51:34 jtb Exp $
-
---- tools/misc/h5cc.in.orig	Wed May  1 17:41:49 2002
-+++ tools/misc/h5cc.in	Wed May  1 17:43:34 2002
-@@ -45,8 +45,8 @@
- SHOW="eval"
- CCBASE="@CC@"
- CLINKERBASE="@CC@"
--CFLAGS="@CFLAGS@"
--LDFLAGS="@LDFLAGS@"
-+CFLAGS="@H5CC_CFLAGS@"
-+LDFLAGS="@H5CC_LDFLAGS@"
- LIBS="@LIBS@"
- 
- CC="${HDF5_CC:-$CCBASE}"
diff --git a/devel/hdf5/patches/patch-ac b/devel/hdf5/patches/patch-ac
deleted file mode 100644
index 775a1d28848..00000000000
--- a/devel/hdf5/patches/patch-ac
+++ /dev/null
@@ -1,18 +0,0 @@
-$NetBSD: patch-ac,v 1.1 2002/05/03 20:51:34 jtb Exp $
-
---- configure.orig	Wed Feb 13 23:26:27 2002
-+++ configure	Wed May  1 19:02:18 2002
-@@ -9486,11 +9488,13 @@
- $extrasub
- s%@SHELL@%$SHELL%g
- s%@CFLAGS@%$CFLAGS%g
-+s%@H5CC_CFLAGS@%$H5CC_CFLAGS%g
- s%@CPPFLAGS@%$CPPFLAGS%g
- s%@CXXFLAGS@%$CXXFLAGS%g
- s%@FFLAGS@%$FFLAGS%g
- s%@DEFS@%$DEFS%g
- s%@LDFLAGS@%$LDFLAGS%g
-+s%@H5CC_LDFLAGS@%$H5CC_LDFLAGS%g
- s%@LIBS@%$LIBS%g
- s%@exec_prefix@%$exec_prefix%g
- s%@prefix@%$prefix%g