summaryrefslogtreecommitdiff
path: root/math
diff options
context:
space:
mode:
authorjlam <jlam@pkgsrc.org>2000-08-11 23:02:37 +0000
committerjlam <jlam@pkgsrc.org>2000-08-11 23:02:37 +0000
commita3e1ef88eb4380d3fa9b28541fbcf34b2650b206 (patch)
tree3a0886a4e090712d4c8a088873a0c04a518e7dce /math
parentaff681b155c95123468c0490d267a204fc44cd46 (diff)
downloadpkgsrc-a3e1ef88eb4380d3fa9b28541fbcf34b2650b206.tar.gz
Update R to 1.1.0. Many additions and bug-fixes from 1.1.0 make this
a more usable replacement for S/S-PLUS.
Diffstat (limited to 'math')
-rw-r--r--math/R/Makefile39
-rw-r--r--math/R/files/md54
-rw-r--r--math/R/files/patch-sum7
-rw-r--r--math/R/patches/patch-aa25
-rw-r--r--math/R/patches/patch-ab29
-rw-r--r--math/R/patches/patch-ae13
-rw-r--r--math/R/patches/patch-ag17
-rw-r--r--math/R/pkg/PLIST128
8 files changed, 155 insertions, 107 deletions
diff --git a/math/R/Makefile b/math/R/Makefile
index d9ec4391f80..4dc1788f988 100644
--- a/math/R/Makefile
+++ b/math/R/Makefile
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.12 2000/04/19 15:30:05 jlam Exp $
+# $NetBSD: Makefile,v 1.13 2000/08/11 23:02:37 jlam Exp $
#
-DISTNAME= R-1.0.1
+DISTNAME= R-1.1.0
CATEGORIES= math
MASTER_SITES= http://cran.r-project.org/src/base/ \
ftp://cran.r-project.org/pub/R/src/base/ \
@@ -19,7 +19,10 @@ EXTRACT_SUFX= .tgz
MAINTAINER= jlam@netbsd.org
HOMEPAGE= http://cran.r-project.org/
+BUILD_DEPENDS+= autoreconf:../../devel/autoconf
DEPENDS+= readline>=4.0:../../devel/readline
+DEPENDS+= jpeg-*:../../graphics/jpeg
+DEPENDS+= png-*:../../graphics/png
USE_FORTRAN= # defined
USE_X11= # defined
@@ -27,13 +30,22 @@ USE_PERL5= # defined
USE_GMAKE= # defined
GNU_CONFIGURE= # defined
-CONFIGURE_ARGS+= --enable-readline --with-x
-CONFIGURE_ARGS+= --without-gnome --without-libmoto
-CONFIGURE_ARGS+= --without-blas --without-blas-risc
+CONFIGURE_ARGS+= --with-x
+CONFIGURE_ARGS+= --with-readline
+CONFIGURE_ARGS+= --without-gnome # not yet stable
+CONFIGURE_ARGS+= --without-tcltk # not yet stable
+CONFIGURE_ARGS+= --without-atlas
+CONFIGURE_ARGS+= --without-blas
+CONFIGURE_ARGS+= --without-blas_risc
CONFIGURE_ARGS+= --without-dxml
+CONFIGURE_ARGS+= --without-libmoto
+
CONFIGURE_ENV+= CPPFLAGS="${CPPFLAGS}"
-CONFIGURE_ENV+= MAKE="${LOCALBASE}/bin/gmake"
+CONFIGURE_ENV+= LIBS="${LIBS}"
+CONFIGURE_ENV+= MAKE="${MAKE_PROGRAM}"
+
CPPFLAGS+= -I${LOCALBASE}/include # readline/readline.h
+LIBS+= -ltermcap # -lreadline -ltermcap
.include "../../mk/bsd.prefs.mk"
@@ -49,16 +61,13 @@ R_PAPERSIZE= Letter
.endif
CONFIGURE_ENV+= R_PAPERSIZE="${R_PAPERSIZE}"
-.if (${OPSYS} == "SunOS")
-BSD_INSTALL?= /usr/ucb/install
-.else
-BSD_INSTALL?= /usr/bin/install
-.endif
-INSTALL_OWN_SCRIPT= ${BSD_INSTALL} ${COPY} -o ${BINOWN} -g ${BINGRP} -m ${BINMODE}
-INSTALL_SCRIPT= ${BSD_INSTALL} ${COPY} -m ${BINMODE}
-INSTALL_DATA= ${BSD_INSTALL} ${COPY} -m 644
+# These macros are used during the build, so strip off the -o,-g flags.
+#
+INSTALL_DATA= ${INSTALL} ${COPY} -m ${SHAREMODE}
+INSTALL_SCRIPT= ${INSTALL} ${COPY} -m ${BINMODE}
-MAKE_ENV+= INSTALL_OWN_SCRIPT="${INSTALL_OWN_SCRIPT}"
+pre-configure:
+ cd ${WRKSRC} && autoreconf
post-install:
${CHOWN} -R ${SHAREOWN}:${SHAREGRP} ${PREFIX}/lib/R
diff --git a/math/R/files/md5 b/math/R/files/md5
index 609a22d6ae0..91b17576b7f 100644
--- a/math/R/files/md5
+++ b/math/R/files/md5
@@ -1,3 +1,3 @@
-$NetBSD: md5,v 1.6 2000/04/19 15:30:06 jlam Exp $
+$NetBSD: md5,v 1.7 2000/08/11 23:02:37 jlam Exp $
-MD5 (R-1.0.1.tgz) = f8cf4d9ef7324b0718456f5f8a21adad
+MD5 (R-1.1.0.tgz) = 85fdcf912dcf53d39ba128344081481d
diff --git a/math/R/files/patch-sum b/math/R/files/patch-sum
index c5e25c6ce5c..5b57d3dfef4 100644
--- a/math/R/files/patch-sum
+++ b/math/R/files/patch-sum
@@ -1,6 +1,3 @@
-$NetBSD: patch-sum,v 1.6 2000/06/20 15:40:12 dmcmahill Exp $
+$NetBSD: patch-sum,v 1.7 2000/08/11 23:02:38 jlam Exp $
-MD5 (patch-aa) = fb1673fe6c402a5ea29fa83e65eb2e82
-MD5 (patch-ab) = 0d2bbdb7ce0495681717eba8d0503eb0
-MD5 (patch-ae) = 376df20b745d8c9edf0a193a985a6865
-MD5 (patch-ag) = 0a7e7612fcf4bc72c459adaa57aff329
+MD5 (patch-aa) = 4ea2c294ae4a7e2955e10ca540fcee84
diff --git a/math/R/patches/patch-aa b/math/R/patches/patch-aa
index efb51ae9550..305ab8fe433 100644
--- a/math/R/patches/patch-aa
+++ b/math/R/patches/patch-aa
@@ -1,12 +1,15 @@
-$NetBSD: patch-aa,v 1.3 2000/04/19 15:30:06 jlam Exp $
+$NetBSD: patch-aa,v 1.4 2000/08/11 23:02:38 jlam Exp $
---- Makeconf.in.orig Sat Jan 22 15:10:00 2000
-+++ Makeconf.in Mon Apr 17 16:04:58 2000
-@@ -23,6 +23,7 @@
- INSTALL = @INSTALL@
- INSTALL_DATA = @INSTALL_DATA@
- INSTALL_PROGRAM = @INSTALL_PROGRAM@
-+INSTALL_SCRIPT = @INSTALL_SCRIPT@
- INSTALL_DIR = ${INSTALL} -d
- LATEX = @LATEX@
- LDCMD = @LDCMD@
+--- configure.in.orig Wed Jun 14 16:51:52 2000
++++ configure.in Fri Aug 11 18:26:41 2000
+@@ -362,10 +362,6 @@
+ if ${use_libmoto}; then
+ AC_CHECK_LIB(moto, sin)
+ fi
+-AC_CHECK_LIB(ncurses, main,,
+- AC_CHECK_LIB(termcap, main,,
+- AC_CHECK_LIB(termlib, main)
+-))
+ AC_CHECK_LIB(dl, dlopen)
+ AC_CHECK_LIB(z, main)
+
diff --git a/math/R/patches/patch-ab b/math/R/patches/patch-ab
deleted file mode 100644
index 14b93450736..00000000000
--- a/math/R/patches/patch-ab
+++ /dev/null
@@ -1,29 +0,0 @@
-$NetBSD: patch-ab,v 1.7 2000/06/20 15:40:15 dmcmahill Exp $
-
---- configure.orig Fri Apr 14 04:44:15 2000
-+++ configure Mon Apr 17 16:32:22 2000
-@@ -2676,6 +2676,7 @@
- LIBS="$ac_save_LIBS"
-
- fi
-+if false; then
- if eval "test \"`echo '$ac_cv_lib_'$ac_lib_var`\" = yes"; then
- echo "$ac_t""yes" 1>&6
- ac_tr_lib=HAVE_LIB`echo ncurses | sed -e 's/[^a-zA-Z0-9_]/_/g' \
-@@ -2685,7 +2686,7 @@
- EOF
-
- LIBS="-lncurses $LIBS"
--
-+fi
- else
- echo "$ac_t""no" 1>&6
- echo $ac_n "checking for main in -ltermcap""... $ac_c" 1>&6
-@@ -5730,5 +5731,5 @@
- shlibldflags="-shared"
- else
-- shlibldflags="-Bshareable"
-+ shlibldflags="-shared"
- fi
- ;;
-
diff --git a/math/R/patches/patch-ae b/math/R/patches/patch-ae
deleted file mode 100644
index e9a3585b82a..00000000000
--- a/math/R/patches/patch-ae
+++ /dev/null
@@ -1,13 +0,0 @@
-$NetBSD: patch-ae,v 1.4 2000/04/19 15:30:06 jlam Exp $
-
---- Makefile.in.orig Mon Feb 21 02:03:26 2000
-+++ Makefile.in Mon Apr 17 16:11:47 2000
-@@ -74,7 +74,7 @@
- @for f in `ls bin/* | grep -v '^bin/R\**$$' \
- | grep -v '^bin/R.X11\**$$' \
- | grep -v '^bin/R.GNOME\**$$'`; do \
-- $(INSTALL) $${f} $(rhome)/bin; \
-+ $(INSTALL_SCRIPT) $${f} $(rhome)/bin; \
- done
- @echo "installing headers ..."
- @for f in include/*.h; do \
diff --git a/math/R/patches/patch-ag b/math/R/patches/patch-ag
deleted file mode 100644
index dfbf3367a87..00000000000
--- a/math/R/patches/patch-ag
+++ /dev/null
@@ -1,17 +0,0 @@
-$NetBSD: patch-ag,v 1.3 2000/04/19 15:30:07 jlam Exp $
-
---- src/scripts/Makefile.in.orig Mon Feb 21 05:49:10 2000
-+++ src/scripts/Makefile.in Mon Apr 17 16:13:11 2000
-@@ -38,10 +38,10 @@
- > $(top_builddir)/bin/R
- @chmod +x $(top_builddir)/bin/R
- @for f in $(SCRIPTS_S); do \
-- $(INSTALL) $(srcdir)/$$f $(top_builddir)/bin; \
-+ $(INSTALL_SCRIPT) $(srcdir)/$$f $(top_builddir)/bin; \
- done
- @for f in $(SCRIPTS_B); do \
-- $(INSTALL) $$f $(top_builddir)/bin; \
-+ $(INSTALL_SCRIPT) $$f $(top_builddir)/bin; \
- done
-
- $(SCRIPTS_B): $(top_builddir)/config.status
diff --git a/math/R/pkg/PLIST b/math/R/pkg/PLIST
index 898212fb36b..b4131419d58 100644
--- a/math/R/pkg/PLIST
+++ b/math/R/pkg/PLIST
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.7 2000/06/20 15:40:16 dmcmahill Exp $
+@comment $NetBSD: PLIST,v 1.8 2000/08/11 23:02:40 jlam Exp $
bin/R
lib/R/COPYING
lib/R/COPYRIGHTS
@@ -43,12 +43,14 @@ lib/R/bin/BATCH
lib/R/bin/COMPILE
lib/R/bin/INSTALL
lib/R/bin/R
-lib/R/bin/R.X11
+lib/R/bin/R.bin
lib/R/bin/REMOVE
+lib/R/bin/R_X11.so
lib/R/bin/Rd2contents
lib/R/bin/Rd2dvi
lib/R/bin/Rd2txt
lib/R/bin/Rdconv
+lib/R/bin/Rdiff
lib/R/bin/Rdindex
lib/R/bin/SHLIB
lib/R/bin/Sd2Rd
@@ -56,16 +58,15 @@ lib/R/bin/build
lib/R/bin/build-help
lib/R/bin/check
lib/R/bin/filename
-lib/R/bin/fwf2table
lib/R/bin/help
lib/R/bin/help.links
-lib/R/bin/help.pretty
lib/R/bin/maketitle
lib/R/bin/massage-Examples
lib/R/bin/pager
lib/R/demos/dynload/README
lib/R/demos/dynload/zero.R
lib/R/demos/dynload/zero.c
+lib/R/demos/dynload/zero.so
lib/R/demos/graphics/graphics.R
lib/R/demos/graphics/image.R
lib/R/demos/language/is-things.R
@@ -74,6 +75,8 @@ lib/R/demos/language/scoping.R
lib/R/demos/models/glm-v+r.R
lib/R/demos/models/lm+glm.R
lib/R/demos/nlm/valley.R
+lib/R/demos/tcltk/tkdensity.R
+lib/R/demos/tcltk/tkttest.R
lib/R/doc/KEYWORDS
lib/R/doc/KEYWORDS.db
lib/R/doc/html/R.css
@@ -105,6 +108,7 @@ lib/R/doc/html/thanks.html
lib/R/doc/html/up.jpg
lib/R/doc/manual/Rd.sty
lib/R/etc/Makeconf
+lib/R/etc/Makeconf-tests
lib/R/etc/Rdconvlib.pl
lib/R/etc/buildlib.pl
lib/R/etc/html-layout.pl
@@ -121,6 +125,7 @@ lib/R/include/R_ext/PrtUtil.h
lib/R/include/R_ext/RS.h
lib/R/include/R_ext/Random.h
lib/R/include/R_ext/Utils.h
+lib/R/include/R_ext/eventloop.h
lib/R/include/R_ext/f2c.h
lib/R/include/Rconfig.h
lib/R/include/Rdefines.h
@@ -214,7 +219,6 @@ lib/R/library/base/R-ex/apropos.R
lib/R/library/base/R-ex/args.R
lib/R/library/base/R-ex/array.R
lib/R/library/base/R-ex/arrows.R
-lib/R/library/base/R-ex/as.char.or.expr.R
lib/R/library/base/R-ex/as.function.R
lib/R/library/base/R-ex/assign.R
lib/R/library/base/R-ex/attach.R
@@ -235,11 +239,13 @@ lib/R/library/base/R-ex/bxp.R
lib/R/library/base/R-ex/by.R
lib/R/library/base/R-ex/c.R
lib/R/library/base/R-ex/call.R
+lib/R/library/base/R-ex/cars.R
lib/R/library/base/R-ex/case.names.R
lib/R/library/base/R-ex/cat.R
lib/R/library/base/R-ex/cbind.R
lib/R/library/base/R-ex/char.expand.R
lib/R/library/base/R-ex/charmatch.R
+lib/R/library/base/R-ex/chartr.R
lib/R/library/base/R-ex/check.options.R
lib/R/library/base/R-ex/chol.R
lib/R/library/base/R-ex/chol2inv.R
@@ -278,6 +284,7 @@ lib/R/library/base/R-ex/demo.R
lib/R/library/base/R-ex/density.R
lib/R/library/base/R-ex/deparse.R
lib/R/library/base/R-ex/deriv.R
+lib/R/library/base/R-ex/det.R
lib/R/library/base/R-ex/detach.R
lib/R/library/base/R-ex/dev.R
lib/R/library/base/R-ex/dev2.R
@@ -307,6 +314,7 @@ lib/R/library/base/R-ex/eval.R
lib/R/library/base/R-ex/example.R
lib/R/library/base/R-ex/exists.R
lib/R/library/base/R-ex/expand.grid.R
+lib/R/library/base/R-ex/expand.model.frame.R
lib/R/library/base/R-ex/expression.R
lib/R/library/base/R-ex/extractAIC.R
lib/R/library/base/R-ex/factor.R
@@ -349,6 +357,7 @@ lib/R/library/base/R-ex/image.R
lib/R/library/base/R-ex/infert.R
lib/R/library/base/R-ex/influence.measures.R
lib/R/library/base/R-ex/interaction.R
+lib/R/library/base/R-ex/interaction.plot.R
lib/R/library/base/R-ex/interactive.R
lib/R/library/base/R-ex/invisible.R
lib/R/library/base/R-ex/is.empty.R
@@ -397,6 +406,7 @@ lib/R/library/base/R-ex/match.fun.R
lib/R/library/base/R-ex/matmult.R
lib/R/library/base/R-ex/matplot.R
lib/R/library/base/R-ex/matrix.R
+lib/R/library/base/R-ex/max.col.R
lib/R/library/base/R-ex/mean.R
lib/R/library/base/R-ex/median.R
lib/R/library/base/R-ex/memory.profile.R
@@ -409,6 +419,7 @@ lib/R/library/base/R-ex/model.extract.R
lib/R/library/base/R-ex/model.frame.R
lib/R/library/base/R-ex/model.matrix.R
lib/R/library/base/R-ex/model.tables.R
+lib/R/library/base/R-ex/morley.R
lib/R/library/base/R-ex/mosaicplot.R
lib/R/library/base/R-ex/mtcars.R
lib/R/library/base/R-ex/mtext.R
@@ -455,6 +466,7 @@ lib/R/library/base/R-ex/plotfactor.R
lib/R/library/base/R-ex/plotformula.R
lib/R/library/base/R-ex/plotmath.R
lib/R/library/base/R-ex/pmatch.R
+lib/R/library/base/R-ex/png.R
lib/R/library/base/R-ex/points.R
lib/R/library/base/R-ex/poly.R
lib/R/library/base/R-ex/polygon.R
@@ -522,12 +534,14 @@ lib/R/library/base/R-ex/solve.R
lib/R/library/base/R-ex/sort.R
lib/R/library/base/R-ex/splinefun.R
lib/R/library/base/R-ex/split.R
+lib/R/library/base/R-ex/stack.R
lib/R/library/base/R-ex/stackloss.R
lib/R/library/base/R-ex/stars.R
lib/R/library/base/R-ex/stat.anova.R
lib/R/library/base/R-ex/stem.R
lib/R/library/base/R-ex/step.R
lib/R/library/base/R-ex/stop.R
+lib/R/library/base/R-ex/stopifnot.R
lib/R/library/base/R-ex/str.R
lib/R/library/base/R-ex/stripplot.R
lib/R/library/base/R-ex/strsplit.R
@@ -543,6 +557,7 @@ lib/R/library/base/R-ex/svd.R
lib/R/library/base/R-ex/sweep.R
lib/R/library/base/R-ex/swiss.R
lib/R/library/base/R-ex/switch.R
+lib/R/library/base/R-ex/symbols.R
lib/R/library/base/R-ex/symnum.R
lib/R/library/base/R-ex/sys.parent.R
lib/R/library/base/R-ex/system.R
@@ -553,6 +568,7 @@ lib/R/library/base/R-ex/table.R
lib/R/library/base/R-ex/tabulate.R
lib/R/library/base/R-ex/tapply.R
lib/R/library/base/R-ex/tempfile.R
+lib/R/library/base/R-ex/termplot.R
lib/R/library/base/R-ex/text.R
lib/R/library/base/R-ex/time.R
lib/R/library/base/R-ex/title.R
@@ -570,7 +586,6 @@ lib/R/library/base/R-ex/unlist.R
lib/R/library/base/R-ex/unname.R
lib/R/library/base/R-ex/update.R
lib/R/library/base/R-ex/uspop.R
-lib/R/library/base/R-ex/var.R
lib/R/library/base/R-ex/vector.R
lib/R/library/base/R-ex/volcano.R
lib/R/library/base/R-ex/warning.R
@@ -579,10 +594,12 @@ lib/R/library/base/R-ex/warpbreaks.R
lib/R/library/base/R-ex/weighted.mean.R
lib/R/library/base/R-ex/weighted.residuals.R
lib/R/library/base/R-ex/which.R
+lib/R/library/base/R-ex/which.min.R
lib/R/library/base/R-ex/window.R
lib/R/library/base/R-ex/women.R
lib/R/library/base/R-ex/write.R
lib/R/library/base/R-ex/xy.coords.R
+lib/R/library/base/R-ex/xyz.coords.R
lib/R/library/base/R-ex/zAlias.R
lib/R/library/base/R-ex/zC.R
lib/R/library/base/R-ex/zMachine.R
@@ -623,6 +640,7 @@ lib/R/library/base/data/iris.R
lib/R/library/base/data/iris3.R
lib/R/library/base/data/islands.R
lib/R/library/base/data/longley.R
+lib/R/library/base/data/morley.tab
lib/R/library/base/data/mtcars.R
lib/R/library/base/data/nhtemp.R
lib/R/library/base/data/phones.R
@@ -702,6 +720,7 @@ lib/R/library/base/help/Rhome
lib/R/library/base/help/Round
lib/R/library/base/help/SHLIB
lib/R/library/base/help/SignRank
+lib/R/library/base/help/Signals
lib/R/library/base/help/Special
lib/R/library/base/help/Startup
lib/R/library/base/help/TDist
@@ -740,7 +759,6 @@ lib/R/library/base/help/apropos
lib/R/library/base/help/args
lib/R/library/base/help/array
lib/R/library/base/help/arrows
-lib/R/library/base/help/as.char.or.expr
lib/R/library/base/help/as.function
lib/R/library/base/help/assign
lib/R/library/base/help/attach
@@ -771,6 +789,7 @@ lib/R/library/base/help/cbind
lib/R/library/base/help/char.expand
lib/R/library/base/help/character
lib/R/library/base/help/charmatch
+lib/R/library/base/help/chartr
lib/R/library/base/help/check.options
lib/R/library/base/help/chickwts
lib/R/library/base/help/chol
@@ -817,6 +836,7 @@ lib/R/library/base/help/demo
lib/R/library/base/help/density
lib/R/library/base/help/deparse
lib/R/library/base/help/deriv
+lib/R/library/base/help/det
lib/R/library/base/help/detach
lib/R/library/base/help/dev
lib/R/library/base/help/dev2
@@ -851,6 +871,7 @@ lib/R/library/base/help/eval
lib/R/library/base/help/example
lib/R/library/base/help/exists
lib/R/library/base/help/expand.grid
+lib/R/library/base/help/expand.model.frame
lib/R/library/base/help/expression
lib/R/library/base/help/extractAIC
lib/R/library/base/help/factor
@@ -888,6 +909,7 @@ lib/R/library/base/help/gnome
lib/R/library/base/help/gray
lib/R/library/base/help/grep
lib/R/library/base/help/grid
+lib/R/library/base/help/gtk
lib/R/library/base/help/help
lib/R/library/base/help/help.search
lib/R/library/base/help/help.start
@@ -902,6 +924,7 @@ lib/R/library/base/help/infert
lib/R/library/base/help/influence.measures
lib/R/library/base/help/integer
lib/R/library/base/help/interaction
+lib/R/library/base/help/interaction.plot
lib/R/library/base/help/interactive
lib/R/library/base/help/invisible
lib/R/library/base/help/iris
@@ -912,7 +935,6 @@ lib/R/library/base/help/is.language
lib/R/library/base/help/is.object
lib/R/library/base/help/is.recursive
lib/R/library/base/help/is.single
-lib/R/library/base/help/is.symbol
lib/R/library/base/help/isR
lib/R/library/base/help/islands
lib/R/library/base/help/jitter
@@ -961,6 +983,7 @@ lib/R/library/base/help/match.fun
lib/R/library/base/help/matmult
lib/R/library/base/help/matplot
lib/R/library/base/help/matrix
+lib/R/library/base/help/max.col
lib/R/library/base/help/mean
lib/R/library/base/help/median
lib/R/library/base/help/memory.profile
@@ -973,6 +996,7 @@ lib/R/library/base/help/model.extract
lib/R/library/base/help/model.frame
lib/R/library/base/help/model.matrix
lib/R/library/base/help/model.tables
+lib/R/library/base/help/morley
lib/R/library/base/help/mosaicplot
lib/R/library/base/help/mtcars
lib/R/library/base/help/mtext
@@ -1023,6 +1047,7 @@ lib/R/library/base/help/plotfactor
lib/R/library/base/help/plotformula
lib/R/library/base/help/plotmath
lib/R/library/base/help/pmatch
+lib/R/library/base/help/png
lib/R/library/base/help/points
lib/R/library/base/help/poly
lib/R/library/base/help/polygon
@@ -1064,6 +1089,7 @@ lib/R/library/base/help/read.table
lib/R/library/base/help/read.table.url
lib/R/library/base/help/readline
lib/R/library/base/help/real
+lib/R/library/base/help/recordplot
lib/R/library/base/help/rect
lib/R/library/base/help/relevel
lib/R/library/base/help/rep
@@ -1100,6 +1126,7 @@ lib/R/library/base/help/sort
lib/R/library/base/help/source
lib/R/library/base/help/splinefun
lib/R/library/base/help/split
+lib/R/library/base/help/stack
lib/R/library/base/help/stackloss
lib/R/library/base/help/stars
lib/R/library/base/help/start
@@ -1108,6 +1135,7 @@ lib/R/library/base/help/state
lib/R/library/base/help/stem
lib/R/library/base/help/step
lib/R/library/base/help/stop
+lib/R/library/base/help/stopifnot
lib/R/library/base/help/str
lib/R/library/base/help/stripplot
lib/R/library/base/help/strsplit
@@ -1124,6 +1152,7 @@ lib/R/library/base/help/svd
lib/R/library/base/help/sweep
lib/R/library/base/help/swiss
lib/R/library/base/help/switch
+lib/R/library/base/help/symbols
lib/R/library/base/help/symnum
lib/R/library/base/help/sys.parent
lib/R/library/base/help/sys.source
@@ -1135,6 +1164,7 @@ lib/R/library/base/help/table
lib/R/library/base/help/tabulate
lib/R/library/base/help/tapply
lib/R/library/base/help/tempfile
+lib/R/library/base/help/termplot
lib/R/library/base/help/terms
lib/R/library/base/help/text
lib/R/library/base/help/time
@@ -1157,7 +1187,6 @@ lib/R/library/base/help/update
lib/R/library/base/help/update.formula
lib/R/library/base/help/update.packages
lib/R/library/base/help/uspop
-lib/R/library/base/help/var
lib/R/library/base/help/vector
lib/R/library/base/help/volcano
lib/R/library/base/help/warning
@@ -1166,12 +1195,15 @@ lib/R/library/base/help/warpbreaks
lib/R/library/base/help/weighted.mean
lib/R/library/base/help/weighted.residuals
lib/R/library/base/help/which
+lib/R/library/base/help/which.min
lib/R/library/base/help/window
lib/R/library/base/help/women
lib/R/library/base/help/write
lib/R/library/base/help/write.table
lib/R/library/base/help/x11
+lib/R/library/base/help/xfig
lib/R/library/base/help/xy.coords
+lib/R/library/base/help/xyz.coords
lib/R/library/base/help/zAlias
lib/R/library/base/help/zC
lib/R/library/base/help/zMachine
@@ -1236,6 +1268,7 @@ lib/R/library/base/html/Rhome.html
lib/R/library/base/html/Round.html
lib/R/library/base/html/SHLIB.html
lib/R/library/base/html/SignRank.html
+lib/R/library/base/html/Signals.html
lib/R/library/base/html/Special.html
lib/R/library/base/html/Startup.html
lib/R/library/base/html/TDist.html
@@ -1274,7 +1307,6 @@ lib/R/library/base/html/apropos.html
lib/R/library/base/html/args.html
lib/R/library/base/html/array.html
lib/R/library/base/html/arrows.html
-lib/R/library/base/html/as.char.or.expr.html
lib/R/library/base/html/as.function.html
lib/R/library/base/html/assign.html
lib/R/library/base/html/attach.html
@@ -1305,6 +1337,7 @@ lib/R/library/base/html/cbind.html
lib/R/library/base/html/char.expand.html
lib/R/library/base/html/character.html
lib/R/library/base/html/charmatch.html
+lib/R/library/base/html/chartr.html
lib/R/library/base/html/check.options.html
lib/R/library/base/html/chickwts.html
lib/R/library/base/html/chol.html
@@ -1351,6 +1384,7 @@ lib/R/library/base/html/demo.html
lib/R/library/base/html/density.html
lib/R/library/base/html/deparse.html
lib/R/library/base/html/deriv.html
+lib/R/library/base/html/det.html
lib/R/library/base/html/detach.html
lib/R/library/base/html/dev.html
lib/R/library/base/html/dev2.html
@@ -1385,6 +1419,7 @@ lib/R/library/base/html/eval.html
lib/R/library/base/html/example.html
lib/R/library/base/html/exists.html
lib/R/library/base/html/expand.grid.html
+lib/R/library/base/html/expand.model.frame.html
lib/R/library/base/html/expression.html
lib/R/library/base/html/extractAIC.html
lib/R/library/base/html/factor.html
@@ -1422,6 +1457,7 @@ lib/R/library/base/html/gnome.html
lib/R/library/base/html/gray.html
lib/R/library/base/html/grep.html
lib/R/library/base/html/grid.html
+lib/R/library/base/html/gtk.html
lib/R/library/base/html/help.html
lib/R/library/base/html/help.search.html
lib/R/library/base/html/help.start.html
@@ -1436,6 +1472,7 @@ lib/R/library/base/html/infert.html
lib/R/library/base/html/influence.measures.html
lib/R/library/base/html/integer.html
lib/R/library/base/html/interaction.html
+lib/R/library/base/html/interaction.plot.html
lib/R/library/base/html/interactive.html
lib/R/library/base/html/invisible.html
lib/R/library/base/html/iris.html
@@ -1446,7 +1483,6 @@ lib/R/library/base/html/is.language.html
lib/R/library/base/html/is.object.html
lib/R/library/base/html/is.recursive.html
lib/R/library/base/html/is.single.html
-lib/R/library/base/html/is.symbol.html
lib/R/library/base/html/isR.html
lib/R/library/base/html/islands.html
lib/R/library/base/html/jitter.html
@@ -1495,6 +1531,7 @@ lib/R/library/base/html/match.html
lib/R/library/base/html/matmult.html
lib/R/library/base/html/matplot.html
lib/R/library/base/html/matrix.html
+lib/R/library/base/html/max.col.html
lib/R/library/base/html/mean.html
lib/R/library/base/html/median.html
lib/R/library/base/html/memory.profile.html
@@ -1507,6 +1544,7 @@ lib/R/library/base/html/model.extract.html
lib/R/library/base/html/model.frame.html
lib/R/library/base/html/model.matrix.html
lib/R/library/base/html/model.tables.html
+lib/R/library/base/html/morley.html
lib/R/library/base/html/mosaicplot.html
lib/R/library/base/html/mtcars.html
lib/R/library/base/html/mtext.html
@@ -1557,6 +1595,7 @@ lib/R/library/base/html/plotfactor.html
lib/R/library/base/html/plotformula.html
lib/R/library/base/html/plotmath.html
lib/R/library/base/html/pmatch.html
+lib/R/library/base/html/png.html
lib/R/library/base/html/points.html
lib/R/library/base/html/poly.html
lib/R/library/base/html/polygon.html
@@ -1598,6 +1637,7 @@ lib/R/library/base/html/read.table.html
lib/R/library/base/html/read.table.url.html
lib/R/library/base/html/readline.html
lib/R/library/base/html/real.html
+lib/R/library/base/html/recordplot.html
lib/R/library/base/html/rect.html
lib/R/library/base/html/relevel.html
lib/R/library/base/html/rep.html
@@ -1634,6 +1674,7 @@ lib/R/library/base/html/sort.html
lib/R/library/base/html/source.html
lib/R/library/base/html/splinefun.html
lib/R/library/base/html/split.html
+lib/R/library/base/html/stack.html
lib/R/library/base/html/stackloss.html
lib/R/library/base/html/stars.html
lib/R/library/base/html/start.html
@@ -1642,6 +1683,7 @@ lib/R/library/base/html/state.html
lib/R/library/base/html/stem.html
lib/R/library/base/html/step.html
lib/R/library/base/html/stop.html
+lib/R/library/base/html/stopifnot.html
lib/R/library/base/html/str.html
lib/R/library/base/html/stripplot.html
lib/R/library/base/html/strsplit.html
@@ -1658,6 +1700,7 @@ lib/R/library/base/html/svd.html
lib/R/library/base/html/sweep.html
lib/R/library/base/html/swiss.html
lib/R/library/base/html/switch.html
+lib/R/library/base/html/symbols.html
lib/R/library/base/html/symnum.html
lib/R/library/base/html/sys.parent.html
lib/R/library/base/html/sys.source.html
@@ -1669,6 +1712,7 @@ lib/R/library/base/html/table.html
lib/R/library/base/html/tabulate.html
lib/R/library/base/html/tapply.html
lib/R/library/base/html/tempfile.html
+lib/R/library/base/html/termplot.html
lib/R/library/base/html/terms.html
lib/R/library/base/html/text.html
lib/R/library/base/html/time.html
@@ -1691,7 +1735,6 @@ lib/R/library/base/html/update.formula.html
lib/R/library/base/html/update.html
lib/R/library/base/html/update.packages.html
lib/R/library/base/html/uspop.html
-lib/R/library/base/html/var.html
lib/R/library/base/html/vector.html
lib/R/library/base/html/volcano.html
lib/R/library/base/html/warning.html
@@ -1700,12 +1743,15 @@ lib/R/library/base/html/warpbreaks.html
lib/R/library/base/html/weighted.mean.html
lib/R/library/base/html/weighted.residuals.html
lib/R/library/base/html/which.html
+lib/R/library/base/html/which.min.html
lib/R/library/base/html/window.html
lib/R/library/base/html/women.html
lib/R/library/base/html/write.html
lib/R/library/base/html/write.table.html
lib/R/library/base/html/x11.html
+lib/R/library/base/html/xfig.html
lib/R/library/base/html/xy.coords.html
+lib/R/library/base/html/xyz.coords.html
lib/R/library/base/html/zAlias.html
lib/R/library/base/html/zC.html
lib/R/library/base/html/zMachine.html
@@ -1769,6 +1815,7 @@ lib/R/library/base/latex/Rhome.tex
lib/R/library/base/latex/Round.tex
lib/R/library/base/latex/SHLIB.tex
lib/R/library/base/latex/SignRank.tex
+lib/R/library/base/latex/Signals.tex
lib/R/library/base/latex/Special.tex
lib/R/library/base/latex/Startup.tex
lib/R/library/base/latex/TDist.tex
@@ -1807,7 +1854,6 @@ lib/R/library/base/latex/apropos.tex
lib/R/library/base/latex/args.tex
lib/R/library/base/latex/array.tex
lib/R/library/base/latex/arrows.tex
-lib/R/library/base/latex/as.char.or.expr.tex
lib/R/library/base/latex/as.function.tex
lib/R/library/base/latex/assign.tex
lib/R/library/base/latex/attach.tex
@@ -1838,6 +1884,7 @@ lib/R/library/base/latex/cbind.tex
lib/R/library/base/latex/char.expand.tex
lib/R/library/base/latex/character.tex
lib/R/library/base/latex/charmatch.tex
+lib/R/library/base/latex/chartr.tex
lib/R/library/base/latex/check.options.tex
lib/R/library/base/latex/chickwts.tex
lib/R/library/base/latex/chol.tex
@@ -1884,6 +1931,7 @@ lib/R/library/base/latex/demo.tex
lib/R/library/base/latex/density.tex
lib/R/library/base/latex/deparse.tex
lib/R/library/base/latex/deriv.tex
+lib/R/library/base/latex/det.tex
lib/R/library/base/latex/detach.tex
lib/R/library/base/latex/dev.tex
lib/R/library/base/latex/dev2.tex
@@ -1918,6 +1966,7 @@ lib/R/library/base/latex/eval.tex
lib/R/library/base/latex/example.tex
lib/R/library/base/latex/exists.tex
lib/R/library/base/latex/expand.grid.tex
+lib/R/library/base/latex/expand.model.frame.tex
lib/R/library/base/latex/expression.tex
lib/R/library/base/latex/extractAIC.tex
lib/R/library/base/latex/factor.scope.tex
@@ -1955,6 +2004,7 @@ lib/R/library/base/latex/gnome.tex
lib/R/library/base/latex/gray.tex
lib/R/library/base/latex/grep.tex
lib/R/library/base/latex/grid.tex
+lib/R/library/base/latex/gtk.tex
lib/R/library/base/latex/help.search.tex
lib/R/library/base/latex/help.start.tex
lib/R/library/base/latex/help.tex
@@ -1968,6 +2018,7 @@ lib/R/library/base/latex/index.search.tex
lib/R/library/base/latex/infert.tex
lib/R/library/base/latex/influence.measures.tex
lib/R/library/base/latex/integer.tex
+lib/R/library/base/latex/interaction.plot.tex
lib/R/library/base/latex/interaction.tex
lib/R/library/base/latex/interactive.tex
lib/R/library/base/latex/invisible.tex
@@ -1979,7 +2030,6 @@ lib/R/library/base/latex/is.language.tex
lib/R/library/base/latex/is.object.tex
lib/R/library/base/latex/is.recursive.tex
lib/R/library/base/latex/is.single.tex
-lib/R/library/base/latex/is.symbol.tex
lib/R/library/base/latex/isR.tex
lib/R/library/base/latex/islands.tex
lib/R/library/base/latex/jitter.tex
@@ -2028,6 +2078,7 @@ lib/R/library/base/latex/match.tex
lib/R/library/base/latex/matmult.tex
lib/R/library/base/latex/matplot.tex
lib/R/library/base/latex/matrix.tex
+lib/R/library/base/latex/max.col.tex
lib/R/library/base/latex/mean.tex
lib/R/library/base/latex/median.tex
lib/R/library/base/latex/memory.profile.tex
@@ -2040,6 +2091,7 @@ lib/R/library/base/latex/model.extract.tex
lib/R/library/base/latex/model.frame.tex
lib/R/library/base/latex/model.matrix.tex
lib/R/library/base/latex/model.tables.tex
+lib/R/library/base/latex/morley.tex
lib/R/library/base/latex/mosaicplot.tex
lib/R/library/base/latex/mtcars.tex
lib/R/library/base/latex/mtext.tex
@@ -2090,6 +2142,7 @@ lib/R/library/base/latex/plotfactor.tex
lib/R/library/base/latex/plotformula.tex
lib/R/library/base/latex/plotmath.tex
lib/R/library/base/latex/pmatch.tex
+lib/R/library/base/latex/png.tex
lib/R/library/base/latex/points.tex
lib/R/library/base/latex/poly.tex
lib/R/library/base/latex/polygon.tex
@@ -2131,6 +2184,7 @@ lib/R/library/base/latex/read.table.tex
lib/R/library/base/latex/read.table.url.tex
lib/R/library/base/latex/readline.tex
lib/R/library/base/latex/real.tex
+lib/R/library/base/latex/recordplot.tex
lib/R/library/base/latex/rect.tex
lib/R/library/base/latex/relevel.tex
lib/R/library/base/latex/rep.tex
@@ -2167,6 +2221,7 @@ lib/R/library/base/latex/sort.tex
lib/R/library/base/latex/source.tex
lib/R/library/base/latex/splinefun.tex
lib/R/library/base/latex/split.tex
+lib/R/library/base/latex/stack.tex
lib/R/library/base/latex/stackloss.tex
lib/R/library/base/latex/stars.tex
lib/R/library/base/latex/start.tex
@@ -2175,6 +2230,7 @@ lib/R/library/base/latex/state.tex
lib/R/library/base/latex/stem.tex
lib/R/library/base/latex/step.tex
lib/R/library/base/latex/stop.tex
+lib/R/library/base/latex/stopifnot.tex
lib/R/library/base/latex/str.tex
lib/R/library/base/latex/stripplot.tex
lib/R/library/base/latex/strsplit.tex
@@ -2191,6 +2247,7 @@ lib/R/library/base/latex/svd.tex
lib/R/library/base/latex/sweep.tex
lib/R/library/base/latex/swiss.tex
lib/R/library/base/latex/switch.tex
+lib/R/library/base/latex/symbols.tex
lib/R/library/base/latex/symnum.tex
lib/R/library/base/latex/sys.parent.tex
lib/R/library/base/latex/sys.source.tex
@@ -2202,6 +2259,7 @@ lib/R/library/base/latex/table.tex
lib/R/library/base/latex/tabulate.tex
lib/R/library/base/latex/tapply.tex
lib/R/library/base/latex/tempfile.tex
+lib/R/library/base/latex/termplot.tex
lib/R/library/base/latex/terms.tex
lib/R/library/base/latex/text.tex
lib/R/library/base/latex/time.tex
@@ -2224,7 +2282,6 @@ lib/R/library/base/latex/update.formula.tex
lib/R/library/base/latex/update.packages.tex
lib/R/library/base/latex/update.tex
lib/R/library/base/latex/uspop.tex
-lib/R/library/base/latex/var.tex
lib/R/library/base/latex/vector.tex
lib/R/library/base/latex/volcano.tex
lib/R/library/base/latex/warning.tex
@@ -2232,13 +2289,16 @@ lib/R/library/base/latex/warnings.tex
lib/R/library/base/latex/warpbreaks.tex
lib/R/library/base/latex/weighted.mean.tex
lib/R/library/base/latex/weighted.residuals.tex
+lib/R/library/base/latex/which.min.tex
lib/R/library/base/latex/which.tex
lib/R/library/base/latex/window.tex
lib/R/library/base/latex/women.tex
lib/R/library/base/latex/write.table.tex
lib/R/library/base/latex/write.tex
lib/R/library/base/latex/x11.tex
+lib/R/library/base/latex/xfig.tex
lib/R/library/base/latex/xy.coords.tex
+lib/R/library/base/latex/xyz.coords.tex
lib/R/library/base/latex/zAlias.tex
lib/R/library/base/latex/zC.tex
lib/R/library/base/latex/zMachine.tex
@@ -2266,6 +2326,7 @@ lib/R/library/ctest/R-ex/pairwise.wilcox.test.R
lib/R/library/ctest/R-ex/power.prop.test.R
lib/R/library/ctest/R-ex/power.t.test.R
lib/R/library/ctest/R-ex/prop.test.R
+lib/R/library/ctest/R-ex/quade.test.R
lib/R/library/ctest/R-ex/shapiro.test.R
lib/R/library/ctest/R-ex/t.test.R
lib/R/library/ctest/R-ex/var.test.R
@@ -2296,6 +2357,7 @@ lib/R/library/ctest/help/power.t.test
lib/R/library/ctest/help/print.pairwise.htest
lib/R/library/ctest/help/print.power.htest
lib/R/library/ctest/help/prop.test
+lib/R/library/ctest/help/quade.test
lib/R/library/ctest/help/shapiro.test
lib/R/library/ctest/help/t.test
lib/R/library/ctest/help/var.test
@@ -2323,6 +2385,7 @@ lib/R/library/ctest/html/power.t.test.html
lib/R/library/ctest/html/print.pairwise.htest.html
lib/R/library/ctest/html/print.power.htest.html
lib/R/library/ctest/html/prop.test.html
+lib/R/library/ctest/html/quade.test.html
lib/R/library/ctest/html/shapiro.test.html
lib/R/library/ctest/html/t.test.html
lib/R/library/ctest/html/var.test.html
@@ -2349,6 +2412,7 @@ lib/R/library/ctest/latex/power.t.test.tex
lib/R/library/ctest/latex/print.pairwise.htest.tex
lib/R/library/ctest/latex/print.power.htest.tex
lib/R/library/ctest/latex/prop.test.tex
+lib/R/library/ctest/latex/quade.test.tex
lib/R/library/ctest/latex/shapiro.test.tex
lib/R/library/ctest/latex/t.test.tex
lib/R/library/ctest/latex/var.test.tex
@@ -2588,6 +2652,7 @@ lib/R/library/nls/help/SSfol
lib/R/library/nls/help/SSfpl
lib/R/library/nls/help/SSlogis
lib/R/library/nls/help/SSmicmen
+lib/R/library/nls/help/Theoph
lib/R/library/nls/help/asOneSidedFormula
lib/R/library/nls/help/clearNames
lib/R/library/nls/help/formula.nls
@@ -2627,6 +2692,7 @@ lib/R/library/nls/html/SSfol.html
lib/R/library/nls/html/SSfpl.html
lib/R/library/nls/html/SSlogis.html
lib/R/library/nls/html/SSmicmen.html
+lib/R/library/nls/html/Theoph.html
lib/R/library/nls/html/asOneSidedFormula.html
lib/R/library/nls/html/clearNames.html
lib/R/library/nls/html/formula.nls.html
@@ -2665,6 +2731,7 @@ lib/R/library/nls/latex/SSfol.tex
lib/R/library/nls/latex/SSfpl.tex
lib/R/library/nls/latex/SSlogis.tex
lib/R/library/nls/latex/SSmicmen.tex
+lib/R/library/nls/latex/Theoph.tex
lib/R/library/nls/latex/asOneSidedFormula.tex
lib/R/library/nls/latex/clearNames.tex
lib/R/library/nls/latex/formula.nls.tex
@@ -2765,6 +2832,30 @@ lib/R/library/stepfun/html/stepfun.html
lib/R/library/stepfun/latex/ecdf.tex
lib/R/library/stepfun/latex/plot.stepfun.tex
lib/R/library/stepfun/latex/stepfun.tex
+lib/R/library/tcltk/CONTENTS
+lib/R/library/tcltk/DESCRIPTION
+lib/R/library/tcltk/INDEX
+lib/R/library/tcltk/R-ex/TclInterface.R
+lib/R/library/tcltk/R-ex/TkCommands.R
+lib/R/library/tcltk/R-ex/TkWidgetcmds.R
+lib/R/library/tcltk/R-ex/TkWidgets.R
+lib/R/library/tcltk/R/tcltk
+lib/R/library/tcltk/TITLE
+lib/R/library/tcltk/help/00Titles
+lib/R/library/tcltk/help/AnIndex
+lib/R/library/tcltk/help/TclInterface
+lib/R/library/tcltk/help/TkCommands
+lib/R/library/tcltk/help/TkWidgetcmds
+lib/R/library/tcltk/help/TkWidgets
+lib/R/library/tcltk/html/00Index.html
+lib/R/library/tcltk/html/TclInterface.html
+lib/R/library/tcltk/html/TkCommands.html
+lib/R/library/tcltk/html/TkWidgetcmds.html
+lib/R/library/tcltk/html/TkWidgets.html
+lib/R/library/tcltk/latex/TclInterface.tex
+lib/R/library/tcltk/latex/TkCommands.tex
+lib/R/library/tcltk/latex/TkWidgetcmds.tex
+lib/R/library/tcltk/latex/TkWidgets.tex
lib/R/library/ts/CONTENTS
lib/R/library/ts/DESCRIPTION
lib/R/library/ts/INDEX
@@ -2930,6 +3021,12 @@ man/man1/R.1
@dirrm lib/R/library/ts/R-ex
@dirrm lib/R/library/ts/R
@dirrm lib/R/library/ts
+@dirrm lib/R/library/tcltk/latex
+@dirrm lib/R/library/tcltk/html
+@dirrm lib/R/library/tcltk/help
+@dirrm lib/R/library/tcltk/R-ex
+@dirrm lib/R/library/tcltk/R
+@dirrm lib/R/library/tcltk
@dirrm lib/R/library/stepfun/latex
@dirrm lib/R/library/stepfun/html
@dirrm lib/R/library/stepfun/help
@@ -3002,6 +3099,7 @@ man/man1/R.1
@dirrm lib/R/doc/html/search
@dirrm lib/R/doc/html
@dirrm lib/R/doc
+@dirrm lib/R/demos/tcltk
@dirrm lib/R/demos/nlm
@dirrm lib/R/demos/models
@dirrm lib/R/demos/language