diff options
author | drochner <drochner> | 2010-07-16 12:17:59 +0000 |
---|---|---|
committer | drochner <drochner> | 2010-07-16 12:17:59 +0000 |
commit | a5c546cafb8aff8e4d8c4bb014747af88da06f1b (patch) | |
tree | 033d592bda12d2d6b27d087eab9a9a10af1e1445 /math | |
parent | 7ab0f9e35b45d5c0c61e949a52239aa9fb7821bc (diff) | |
download | pkgsrc-a5c546cafb8aff8e4d8c4bb014747af88da06f1b.tar.gz |
update to 2.2
changes:
-new compressor called Blosc (speed-up)
-A new `tables.Expr` module (based on Numexpr) that allows to do
persistent, on-disk computations on many algebraic operations.
-Support for HDF5 hard links, soft links and automatic external links
-Suport for 'fancy' indexing
-bugfixes
Diffstat (limited to 'math')
-rw-r--r-- | math/py-pytables/Makefile | 10 | ||||
-rw-r--r-- | math/py-pytables/PLIST | 43 | ||||
-rw-r--r-- | math/py-pytables/distinfo | 10 | ||||
-rw-r--r-- | math/py-pytables/patches/patch-aa | 8 |
4 files changed, 34 insertions, 37 deletions
diff --git a/math/py-pytables/Makefile b/math/py-pytables/Makefile index 1923e6596bf..8b3835a0c99 100644 --- a/math/py-pytables/Makefile +++ b/math/py-pytables/Makefile @@ -1,10 +1,10 @@ -# $NetBSD: Makefile,v 1.17 2009/11/15 15:56:55 drochner Exp $ +# $NetBSD: Makefile,v 1.18 2010/07/16 12:17:59 drochner Exp $ # -DISTNAME= tables-2.1.2 -PKGNAME= ${PYPKGPREFIX}-pytables-2.1.2 +DISTNAME= tables-2.2 +PKGNAME= ${PYPKGPREFIX}-pytables-2.2 CATEGORIES= math python -MASTER_SITES= http://www.pytables.org/download/pytables-2.1.2/ +MASTER_SITES= http://www.pytables.org/download/pytables-2.2/ MAINTAINER= pkgsrc-users@NetBSD.org HOMEPAGE= http://www.pytables.org/ @@ -40,4 +40,6 @@ do-test: .include "../../devel/zlib/buildlink3.mk" .include "../../archivers/bzip2/buildlink3.mk" .include "../../math/py-numpy/buildlink3.mk" +.include "../../devel/py-cython/buildlink3.mk" +.include "../../math/py-numexpr/buildlink3.mk" .include "../../mk/bsd.pkg.mk" diff --git a/math/py-pytables/PLIST b/math/py-pytables/PLIST index ab312c4fb7b..20908f89acd 100644 --- a/math/py-pytables/PLIST +++ b/math/py-pytables/PLIST @@ -1,4 +1,4 @@ -@comment $NetBSD: PLIST,v 1.7 2009/12/16 16:59:48 drochner Exp $ +@comment $NetBSD: PLIST,v 1.8 2010/07/16 12:17:59 drochner Exp $ bin/nctoh5${PYVERSSUFFIX} bin/ptdump${PYVERSSUFFIX} bin/ptrepack${PYVERSSUFFIX} @@ -40,6 +40,9 @@ ${PYSITELIB}/tables/earray.pyo ${PYSITELIB}/tables/exceptions.py ${PYSITELIB}/tables/exceptions.pyc ${PYSITELIB}/tables/exceptions.pyo +${PYSITELIB}/tables/expression.py +${PYSITELIB}/tables/expression.pyc +${PYSITELIB}/tables/expression.pyo ${PYSITELIB}/tables/file.py ${PYSITELIB}/tables/file.pyc ${PYSITELIB}/tables/file.pyo @@ -56,6 +59,10 @@ ${PYSITELIB}/tables/hdf5Extension.so ${PYSITELIB}/tables/leaf.py ${PYSITELIB}/tables/leaf.pyc ${PYSITELIB}/tables/leaf.pyo +${PYSITELIB}/tables/link.py +${PYSITELIB}/tables/link.pyc +${PYSITELIB}/tables/link.pyo +${PYSITELIB}/tables/linkExtension.so ${PYSITELIB}/tables/misc/__init__.py ${PYSITELIB}/tables/misc/__init__.pyc ${PYSITELIB}/tables/misc/__init__.pyo @@ -122,28 +129,6 @@ ${PYSITELIB}/tables/nra/tests/test_nestedrecords.pyo ${PYSITELIB}/tables/nra/tests/test_nriterators.py ${PYSITELIB}/tables/nra/tests/test_nriterators.pyc ${PYSITELIB}/tables/nra/tests/test_nriterators.pyo -${PYSITELIB}/tables/numexpr/__init__.py -${PYSITELIB}/tables/numexpr/__init__.pyc -${PYSITELIB}/tables/numexpr/__init__.pyo -${PYSITELIB}/tables/numexpr/compiler.py -${PYSITELIB}/tables/numexpr/compiler.pyc -${PYSITELIB}/tables/numexpr/compiler.pyo -${PYSITELIB}/tables/numexpr/expressions.py -${PYSITELIB}/tables/numexpr/expressions.pyc -${PYSITELIB}/tables/numexpr/expressions.pyo -${PYSITELIB}/tables/numexpr/info.py -${PYSITELIB}/tables/numexpr/info.pyc -${PYSITELIB}/tables/numexpr/info.pyo -${PYSITELIB}/tables/numexpr/interpreter.so -${PYSITELIB}/tables/numexpr/setup.py -${PYSITELIB}/tables/numexpr/setup.pyc -${PYSITELIB}/tables/numexpr/setup.pyo -${PYSITELIB}/tables/numexpr/tests/__init__.py -${PYSITELIB}/tables/numexpr/tests/__init__.pyc -${PYSITELIB}/tables/numexpr/tests/__init__.pyo -${PYSITELIB}/tables/numexpr/tests/test_numexpr.py -${PYSITELIB}/tables/numexpr/tests/test_numexpr.pyc -${PYSITELIB}/tables/numexpr/tests/test_numexpr.pyo ${PYSITELIB}/tables/parameters.py ${PYSITELIB}/tables/parameters.pyc ${PYSITELIB}/tables/parameters.pyo @@ -174,20 +159,24 @@ ${PYSITELIB}/tables/tests/Tables_lzo2_shuffle.h5 ${PYSITELIB}/tables/tests/__init__.py ${PYSITELIB}/tables/tests/__init__.pyc ${PYSITELIB}/tables/tests/__init__.pyo +${PYSITELIB}/tables/tests/array_mdatom.h5 ${PYSITELIB}/tables/tests/attr-u16.h5 +${PYSITELIB}/tables/tests/blosc_bigendian.h5 ${PYSITELIB}/tables/tests/check_leaks.py ${PYSITELIB}/tables/tests/check_leaks.pyc ${PYSITELIB}/tables/tests/check_leaks.pyo ${PYSITELIB}/tables/tests/common.py ${PYSITELIB}/tables/tests/common.pyc ${PYSITELIB}/tables/tests/common.pyo +${PYSITELIB}/tables/tests/elink.h5 +${PYSITELIB}/tables/tests/elink2.h5 ${PYSITELIB}/tables/tests/ex-noattr.h5 ${PYSITELIB}/tables/tests/flavored_vlarrays-format1.6.h5 ${PYSITELIB}/tables/tests/idx-std-1.x.h5 ${PYSITELIB}/tables/tests/indexes_2_0.h5 ${PYSITELIB}/tables/tests/nested-type-with-gaps.h5 ${PYSITELIB}/tables/tests/non-chunked-table.h5 -${PYSITELIB}/tables/tests/old-flavors.h5 +${PYSITELIB}/tables/tests/slink.h5 ${PYSITELIB}/tables/tests/smpl_SDSextendible.h5 ${PYSITELIB}/tables/tests/smpl_compound_chunked.h5 ${PYSITELIB}/tables/tests/smpl_enum.h5 @@ -231,6 +220,9 @@ ${PYSITELIB}/tables/tests/test_earray.pyo ${PYSITELIB}/tables/tests/test_enum.py ${PYSITELIB}/tables/tests/test_enum.pyc ${PYSITELIB}/tables/tests/test_enum.pyo +${PYSITELIB}/tables/tests/test_expression.py +${PYSITELIB}/tables/tests/test_expression.pyc +${PYSITELIB}/tables/tests/test_expression.pyo ${PYSITELIB}/tables/tests/test_garbage.py ${PYSITELIB}/tables/tests/test_garbage.pyc ${PYSITELIB}/tables/tests/test_garbage.pyo @@ -240,6 +232,9 @@ ${PYSITELIB}/tables/tests/test_hdf5compat.pyo ${PYSITELIB}/tables/tests/test_index_backcompat.py ${PYSITELIB}/tables/tests/test_index_backcompat.pyc ${PYSITELIB}/tables/tests/test_index_backcompat.pyo +${PYSITELIB}/tables/tests/test_links.py +${PYSITELIB}/tables/tests/test_links.pyc +${PYSITELIB}/tables/tests/test_links.pyo ${PYSITELIB}/tables/tests/test_lists.py ${PYSITELIB}/tables/tests/test_lists.pyc ${PYSITELIB}/tables/tests/test_lists.pyo diff --git a/math/py-pytables/distinfo b/math/py-pytables/distinfo index a4d562ef0e9..2fd1ea50cd2 100644 --- a/math/py-pytables/distinfo +++ b/math/py-pytables/distinfo @@ -1,6 +1,6 @@ -$NetBSD: distinfo,v 1.7 2009/11/15 15:56:55 drochner Exp $ +$NetBSD: distinfo,v 1.8 2010/07/16 12:17:59 drochner Exp $ -SHA1 (tables-2.1.2.tar.gz) = 545cc16491d37e2f6b8ce10bc8bdfa559b174e2e -RMD160 (tables-2.1.2.tar.gz) = 09bfb73e9252baa34aa40274a0b07f6c6cc60d70 -Size (tables-2.1.2.tar.gz) = 4677233 bytes -SHA1 (patch-aa) = 3cf2812635aaa12e445398243ca765d209fb9cdf +SHA1 (tables-2.2.tar.gz) = 1a1c3e01b99fb264ae5fce1fa2950c25e6dcb516 +RMD160 (tables-2.2.tar.gz) = 6a15629c6d08131589e1825d1a237f2d5c887aab +Size (tables-2.2.tar.gz) = 4700399 bytes +SHA1 (patch-aa) = 8d89466c9fc4df63dd39a3fe2bd3e9f8ac7b45c8 diff --git a/math/py-pytables/patches/patch-aa b/math/py-pytables/patches/patch-aa index d9e97d7e16b..bc61145fcc8 100644 --- a/math/py-pytables/patches/patch-aa +++ b/math/py-pytables/patches/patch-aa @@ -1,9 +1,9 @@ -$NetBSD: patch-aa,v 1.6 2009/11/15 15:56:55 drochner Exp $ +$NetBSD: patch-aa,v 1.7 2010/07/16 12:18:00 drochner Exp $ ---- setup.py.orig 2009-03-05 18:12:19.000000000 +0100 +--- setup.py.orig 2010-07-01 11:04:59.000000000 +0000 +++ setup.py -@@ -463,7 +463,7 @@ else: - 'tables.tests', 'tables.numexpr.tests', 'tables.nodes.tests', +@@ -527,7 +527,7 @@ else: + 'tables.tests', 'tables.nodes.tests', 'tables.netcdf3.tests', 'tables.nra.tests'] setuptools_kwargs['scripts'] = [ - 'utils/ptdump', 'utils/ptrepack', 'utils/nctoh5'] |