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authormef <mef@pkgsrc.org>2022-05-05 01:58:35 +0000
committermef <mef@pkgsrc.org>2022-05-05 01:58:35 +0000
commitf9f7077a56d51e746db06914573d2ae1af53a126 (patch)
tree62764e9e617f907fe664f066b0386f57a000b73d /math
parent8cf147681ba0b0eb2c59e723911a23732edbff01 (diff)
downloadpkgsrc-f9f7077a56d51e746db06914573d2ae1af53a126.tar.gz
(math/R-broom) Updated 0.7.9 to 0.8.0
# broom 0.8.0 ------------------------------------------- This update makes significant improvements to documentation, fixes a number of bugs, and brings the development flow of the package up to date with other packages in the tidymodels. In the big picture, this release: * Makes many improvements to documentation: - All tidiers now have example code demonstrating usage in their documentation. Tidiers for base packages as well as selected others also include sample code for visualization of results with ggplot2. - Code examples in the documentation largely now follow consistent style---these changes were made largely to reflect the tidyverse style guide, addressing spacing, object naming, and commenting, among other things. - Examples previously marked with `\dontrun` or `\donttest` have been workshopped to run reliably. * Clarifies errors and warnings for deprecated and un-maintained tidiers. * Ensures that tidiers are placed in files named according to the model-supplying package rather than the model object class for easier navigability of the source code. ### Bug fixes and other improvements * Fix `glance.fixest` error when model includes only fixed effects and no regressors (`#1018` by `@arcruz0`, `#1088` by `@vincentarelbundock`). * Address excessive messaging from `tidy.speedlm` (`#1084` by `@cgoo4`, `#1087` by `@vincentarelbundock`). * Add `nobs` column to the output of `glance.svyglm` (`#1085` by `@fschaffner`, `#1086` by `@vincentarelbundock`). * Ensure `tidy.prcomp` description entries use consistent punctuation (`#1072` by `@PursuitOfDataScience`). * Address breaking changes in `glance.fixest` and `tidy.btergm`. * Simplify handling of `MASS::polr` output in the corresponding `tidy` and `augment` methods. * Align continuous integration with current standards in tidymodels packages. # broom 0.7.12 ------------------------------------------- Nearly identical source to broom 0.7.11—updates the maintainer email address to an address listed in other CRAN packages maintained by the same person. # broom 0.7.11 ------------------------------------------- * Addressed issue with the ordering of original observations in `augment.rqs`. Now function preserves the original `data.frame` names also when the input `data.frame` only has one column (`#1052` by `@ilapros`). * Addressed warning from `tidy.rma` when `x$ddf` has length greater than 1 (`#1064` by `@wviechtb`). * Fix errors in `glance.lavaan` in anticipation of upcoming `tidyr` release (`#1067` by `@DavisVaughan`). * Corrected the confidence interval in `tidy.crr()`. The `tidy.crr(conf.level=)` argument was previously ignored (`#1068` by `@ddsjoberg`). # broom 0.7.10 ------------------------------------------- * Clarifies error when `pysch::mediate` output is dispatched to `tidy.mediate` (`#1037` by `@LukasWallrich`). * Allows user to specify confidence level for `tidy.rma` (`#1041` by `@TarenSanders`) * Clarifies documentation related to usage of `augment_columns()`; most package users should use `augment()` in favor of `augment_columns()`. See `?augment_columns` for more details. * Extends support for `emmeans` by fixing non-standard column names in case of asymptotically derived inferential statistics. (`#1046` by `@crsh`) * Fixes use of index columns in `augment.mlogit` and adds `.resid` column to output. (`#1045`, `#1053`, `#1055`, and `#1056` by `@jamesrrae` and `@gregmacfarlane`) * Correct column naming of standard error measures in `glance.survfit()`. * Various bug fixes and improvements to documentation.
Diffstat (limited to 'math')
-rw-r--r--math/R-broom/Makefile96
-rw-r--r--math/R-broom/distinfo8
2 files changed, 78 insertions, 26 deletions
diff --git a/math/R-broom/Makefile b/math/R-broom/Makefile
index 35b0a4261a9..252e4499004 100644
--- a/math/R-broom/Makefile
+++ b/math/R-broom/Makefile
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.1 2021/09/18 23:05:34 mef Exp $
+# $NetBSD: Makefile,v 1.2 2022/05/05 01:58:35 mef Exp $
R_PKGNAME= broom
-R_PKGVER= 0.7.9
+R_PKGVER= 0.8.0
MAINTAINER= pkgsrc-users@NetBSD.org
COMMENT= Convert Statistical Objects into Tidy Tibbles
@@ -17,31 +17,83 @@ DEPENDS+= R-generics>=0.0.2:../../math/R-generics
DEPENDS+= R-tibble>=3.0.0:../../math/R-tibble
DEPENDS+= R-tidyr>=1.1.3:../../math/R-tidyr
DEPENDS+= R-stringr>=1.4.0:../../textproc/R-stringr
+DEPENDS+= R-ggplot2-[0-9]*:../../graphics/R-ggplot2
-# Packages suggested but not available:
-# 'AER', 'AUC', 'bbmle', 'betareg', 'biglm', 'binGroup', 'btergm',
-# 'caret', 'cmprsk', 'coda', 'drc', 'emmeans', 'epiR', 'ergm',
-# 'fixest', 'gam', 'gee', 'geepack', 'glmnet', 'glmnetUtils', 'gmm',
-# 'irlba', 'joineRML', 'Kendall', 'ks', 'Lahman', 'lavaan', 'leaps',
-# 'lfe', 'lm.beta', 'lmodel2', 'lsmeans', 'margins',
-# 'mclust', 'mediation', 'metafor', 'mfx', 'mlogit', 'modeldata',
-# 'modeltests', 'muhaz', 'multcomp', 'network', 'orcutt', 'ordinal',
-# 'plm', 'poLCA', 'psych', 'quantreg', 'robust', 'robustbase',
-# 'rsample', 'spdep', 'spatialreg', 'speedglm', 'systemfit',
-# 'tseries', 'vars'
-
-
-TEST_DEPENDS+= R-maps-[0-9]*:../../geography/R-maps
-TEST_DEPENDS+= R-maptools-[0-9]*:../../geography/R-maptools
-TEST_DEPENDS+= R-rgeos-[0-9]*:../../geography/R-rgeos
+#EST_DEPENDS+= R-AER-[0-9]*:
TEST_DEPENDS+= R-akima-[0-9]*:../../math/R-akima
-TEST_DEPENDS+= R-lmtest-[0-9]*:../../math/R-lmtest
+#EST_DEPENDS+= R-AUC-[0-9]*:
+TEST_DEPENDS+= R-bbmle-[0-9]*:../../math/R-bbmle
+#EST_DEPENDS+= R-betareg-[0-9]*:
+#EST_DEPENDS+= R-biglm-[0-9]*:
+#EST_DEPENDS+= R-binGroup-[0-9]*:
+#EST_DEPENDS+= R-btergm-[0-9]*:
TEST_DEPENDS+= R-car-[0-9]*:../../math/R-car
-TEST_DEPENDS+= R-survey-[0-9]*:../../math/R-survey
-TEST_DEPENDS+= R-sandwich-[0-9]*:../../math/R-sandwich
-TEST_DEPENDS+= R-zoo-[0-9]*:../../math/R-zoo
+#EST_DEPENDS+= R-caret-[0-9]*:
+#EST_DEPENDS+= R-cmprsk-[0-9]*:
+TEST_DEPENDS+= R-coda-[0-9]*:../../math/R-coda
+TEST_DEPENDS+= R-covr-[0-9]*:../../devel/R-covr
+#EST_DEPENDS+= R-drc-[0-9]*:
+TEST_DEPENDS+= R-e1071-[0-9]*:../../math/R-e1071
+#EST_DEPENDS+= R-emmeans-[0-9]*:
+#EST_DEPENDS+= R-epiR-[0-9]*:
+#EST_DEPENDS+= R-ergm-[0-9]*:
+#EST_DEPENDS+= R-fixest-[0-9]*:
+#EST_DEPENDS+= R-gam-[0-9]*:
+#EST_DEPENDS+= R-gee-[0-9]*:
+#EST_DEPENDS+= R-geepack-[0-9]*:
+#EST_DEPENDS+= R-glmnet-[0-9]*:
+#EST_DEPENDS+= R-glmnetUtils-[0-9]*:
+#EST_DEPENDS+= R-gmm-[0-9]*:
TEST_DEPENDS+= R-Hmisc-[0-9]*:../../misc/R-Hmisc
+#EST_DEPENDS+= R-irlba-[0-9]*:
+#EST_DEPENDS+= R-joineRML-[0-9]*:
+#EST_DEPENDS+= R-Kendall-[0-9]*:
+TEST_DEPENDS+= R-knitr-[0-9]*:../../print/R-knitr
+#EST_DEPENDS+= R-ks-[0-9]*:
+#EST_DEPENDS+= R-Lahman-[0-9]*:
+#EST_DEPENDS+= R-lavaan-[0-9]*:
+#EST_DEPENDS+= R-leaps-[0-9]*:
+#EST_DEPENDS+= R-lfe-[0-9]*:
+#EST_DEPENDS+= R-lm.beta-[0-9]*:
+TEST_DEPENDS+= R-lme4-[0-9]*:../../math/R-lme4
+#EST_DEPENDS+= R-lmodel2-[0-9]*:
+TEST_DEPENDS+= R-lmtest-[0-9]*:../../math/R-lmtest
+#EST_DEPENDS+= R-lsmeans-[0-9]*:
+TEST_DEPENDS+= R-maptools-[0-9]*:../../geography/R-maptools
+#EST_DEPENDS+= R-margins-[0-9]*:
+#EST_DEPENDS+= R-mclust-[0-9]*:../../wip/R-mclust
+#EST_DEPENDS+= R-mediation-[0-9]*:
+#EST_DEPENDS+= R-metafor-[0-9]*:
+#EST_DEPENDS+= R-mfx-[0-9]*:
+#EST_DEPENDS+= R-mlogit-[0-9]*:
+#EST_DEPENDS+= R-modeldata-[0-9]*:
+#EST_DEPENDS+= R-modeltests-[0-9]*:
+#EST_DEPENDS+= R-muhaz-[0-9]*:
+#EST_DEPENDS+= R-multcomp-[0-9]*:
+#EST_DEPENDS+= R-network-[0-9]*:
+#EST_DEPENDS+= R-orcutt-[0-9]*:
+#EST_DEPENDS+= R-ordinal-[0-9]*:
+#EST_DEPENDS+= R-plm-[0-9]*:
+#EST_DEPENDS+= R-poLCA-[0-9]*:
+TEST_DEPENDS+= R-psych-[0-9]*:../../math/R-psych
+TEST_DEPENDS+= R-quantreg-[0-9]*:../../math/R-quantreg
+TEST_DEPENDS+= R-rgeos-[0-9]*:../../geography/R-rgeos
+TEST_DEPENDS+= R-rmarkdown-[0-9]*:../../textproc/R-rmarkdown
+#EST_DEPENDS+= R-robust-[0-9]*:
+TEST_DEPENDS+= R-robustbase-[0-9]*:../../math/R-robustbase
+#EST_DEPENDS+= R-rsample-[0-9]*:
+TEST_DEPENDS+= R-sandwich-[0-9]*:../../math/R-sandwich
+TEST_DEPENDS+= R-sp-[0-9]*:../../math/R-sp
+#EST_DEPENDS+= R-spdep-[0-9]*:
+#EST_DEPENDS+= R-spatialreg-[0-9]*:
+#EST_DEPENDS+= R-speedglm-[0-9]*:
TEST_DEPENDS+= R-spelling-[0-9]*:../../textproc/R-spelling
+TEST_DEPENDS+= R-survey-[0-9]*:../../math/R-survey
+#EST_DEPENDS+= R-systemfit-[0-9]*:
+TEST_DEPENDS+= R-testthat-[0-9]*:../../devel/R-testthat
+TEST_DEPENDS+= R-tseries-[0-9]*:../../finance/R-tseries
+#EST_DEPENDS+= R-vars-[0-9]*:
+TEST_DEPENDS+= R-zoo-[0-9]*:../../math/R-zoo
USE_LANGUAGES= # none
diff --git a/math/R-broom/distinfo b/math/R-broom/distinfo
index cfae5e7b38e..95c832c63c7 100644
--- a/math/R-broom/distinfo
+++ b/math/R-broom/distinfo
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.3 2021/10/26 10:55:24 nia Exp $
+$NetBSD: distinfo,v 1.4 2022/05/05 01:58:35 mef Exp $
-BLAKE2s (R/broom_0.7.9.tar.gz) = 73195bbe7cd5ea7a2c7dba4364925b65a4fa10de93d3c633819544a068f993f1
-SHA512 (R/broom_0.7.9.tar.gz) = 3346882452c311ef61a313a0311d5e30d65dafb8a27622d6bbdfe413e71087fb129999326931c98ffa6ddd5046ae5b2ac609622f31c3ab205ccfda4eac8c803e
-Size (R/broom_0.7.9.tar.gz) = 631606 bytes
+BLAKE2s (R/broom_0.8.0.tar.gz) = 86dca640cd540d430c4659e7eb60b30c14b0fc0a73821e6e07ddc32738f828ab
+SHA512 (R/broom_0.8.0.tar.gz) = b9b0b7db1f151614f20fe42e7bfc34e1fc1aab1498e3280c67a530ba7972645694fb1638448827b14e70a56b9b743e51d7a3a7216c1f49067037ad837ce6e4fe
+Size (R/broom_0.8.0.tar.gz) = 640392 bytes