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authorkei <kei@pkgsrc.org>2002-05-31 19:15:48 +0000
committerkei <kei@pkgsrc.org>2002-05-31 19:15:48 +0000
commita5d9ff6ba5e53b3da2a938b2966e27411077802d (patch)
tree8a8e7077b873667dd099b1e9a5200a6c152e44a4 /misc/molden
parentd53a4a7ece8ae58ee2490e285877a6b881e9c82b (diff)
downloadpkgsrc-a5d9ff6ba5e53b3da2a938b2966e27411077802d.tar.gz
Initial import of molden-3.7 to the NetBSD packages collection.
MOLDEN is a package for displaying molecular density. It is tuned to the Ab Initio packages GAMESS* and GAUSSIAN. It can read all the information it needs from a GAMESS or GAUSSIAN outputfile. In this form it has been running on a CONVEX C-120, an APOLLO DN10000, an IRIS 4D/70GT, a DECSTATION 5000 and a SUN, and in slightly adapted versions on a VAX and a CRAY-YMP. It should run smoothly on most Unix machines. See section INSTALLATION GUIDE on how to install MOLDEN. (* The GAMESS version referred to here is the european version maintaned by M.F. Guest et al not to be confused with the american version maintained by M.W. Schmidt et al) This package was provided by Osamu OISHI and modified slightly by me.
Diffstat (limited to 'misc/molden')
-rw-r--r--misc/molden/DESCR22
-rw-r--r--misc/molden/MESSAGE7
-rw-r--r--misc/molden/Makefile45
-rw-r--r--misc/molden/PLIST54
-rw-r--r--misc/molden/distinfo5
-rw-r--r--misc/molden/patches/patch-aa25
6 files changed, 158 insertions, 0 deletions
diff --git a/misc/molden/DESCR b/misc/molden/DESCR
new file mode 100644
index 00000000000..5215adcc465
--- /dev/null
+++ b/misc/molden/DESCR
@@ -0,0 +1,22 @@
+MOLDEN is a package for displaying molecular density. It is tuned to
+the Ab Initio packages GAMESS* and GAUSSIAN. It can read all the
+information it needs from a GAMESS or GAUSSIAN outputfile. In this
+form it has been running on a CONVEX C-120, an APOLLO DN10000, an
+IRIS 4D/70GT, a DECSTATION 5000 and a SUN, and in slightly adapted
+versions on a VAX and a CRAY-YMP. It should run smoothly on most
+Unix machines. See section INSTALLATION GUIDE on how to install
+MOLDEN. (* The GAMESS version referred to here is the european
+version maintaned by M.F. Guest et al not to be confused with the
+american version maintained by M.W. Schmidt et al)
+
+/***************************************************************************
+ Copyright (C) 1991 Gijs Schaftenaar
+
+ Permission to use, copy this software and its documentation
+ for private use is hereby granted to non profit organisations.
+
+ This software is provided "as is" without express or implied warranty.
+
+ Please cite the author in any work based on this material.
+
+ ***************************************************************************
diff --git a/misc/molden/MESSAGE b/misc/molden/MESSAGE
new file mode 100644
index 00000000000..4e61a8fbff9
--- /dev/null
+++ b/misc/molden/MESSAGE
@@ -0,0 +1,7 @@
+======================================================================
+$NetBSD: MESSAGE,v 1.1.1.1 2002/05/31 19:15:48 kei Exp $
+
+Please register at the below as a Molden User.
+
+http://www.cmbi.kun.nl/~schaft/molden/form.html
+======================================================================
diff --git a/misc/molden/Makefile b/misc/molden/Makefile
new file mode 100644
index 00000000000..d87f4bf427f
--- /dev/null
+++ b/misc/molden/Makefile
@@ -0,0 +1,45 @@
+# $NetBSD: Makefile,v 1.1.1.1 2002/05/31 19:15:48 kei Exp $
+
+DISTNAME= molden3.7
+PKGNAME= molden-3.7
+CATEGORIES= misc # chemistry
+MASTER_SITES= ftp://ftp.cmbi.kun.nl/pub/molgraph/molden/
+EXTRACT_SUFX= .tar.Z
+
+MAINTAINER= oishi@ims.ac.jp
+HOMEPAGE= http://www.cmbi.kun.nl/~schaft/molden/molden.html
+COMMENT= displaying MOLecular DENsity
+
+MAKEFILE= makefile
+ALL_TARGET= molden
+
+USE_FORTRAN= # defined
+
+LICENSE= molden-license
+RESTRICTED= "Redistributing Molden by unregistered user is prohibited."
+NO_SRC_ON_CDROM= ${RESTRICTED}
+NO_BIN_ON_CDROM= ${RESTRICTED}
+NO_SRC_ON_FTP= ${RESTRICTED}
+NO_BIN_ON_FTP= ${RESTRICTED}
+
+_FETCH_MESSAGE= \
+ ${ECHO} "======================================================================"; \
+ ${ECHO} " Please read the WWW page below to know how to get a copy of Molden."; \
+ ${ECHO} ; \
+ ${ECHO} " http://www.cmbi.kun.nl/~schaft/molden/howtoget.html"; \
+ ${ECHO} ; \
+ ${ECHO} " Then put the file ${DISTNAME}${EXTRACT_SUFX} into ${DISTDIR}."; \
+ ${ECHO} "======================================================================"
+
+do-install:
+ ${INSTALL_PROGRAM} ${WRKSRC}/molden ${PREFIX}/bin/
+ for d in doc test utils ; do \
+ ${INSTALL_DATA_DIR} ${PREFIX}/share/molden/$$d ; \
+ for f in ${WRKSRC}/$$d/* ; do \
+ ${INSTALL_DATA} $$f ${PREFIX}/share/molden/$$d ; \
+ done ; \
+ done
+
+.include "../../graphics/Mesa/buildlink.mk"
+.include "../../mk/x11.buildlink.mk"
+.include "../../mk/bsd.pkg.mk"
diff --git a/misc/molden/PLIST b/misc/molden/PLIST
new file mode 100644
index 00000000000..4d10a1d55a5
--- /dev/null
+++ b/misc/molden/PLIST
@@ -0,0 +1,54 @@
+@comment $NetBSD: PLIST,v 1.1.1.1 2002/05/31 19:15:48 kei Exp $
+bin/molden
+share/molden/doc/figures.ps.Z
+share/molden/doc/manual.ps.Z
+share/molden/doc/manual.txt.Z
+share/molden/test/adf.molf
+share/molden/test/ampac.arc
+share/molden/test/ampac.test
+share/molden/test/bucky.xyz
+share/molden/test/chemx.test
+share/molden/test/complex2.out
+share/molden/test/esp.test
+share/molden/test/esp.txt
+share/molden/test/esp.xyz
+share/molden/test/fragment
+share/molden/test/gamess_uk.freq
+share/molden/test/gamess_uk.input
+share/molden/test/gamess_uk.test1
+share/molden/test/gamess_uk.test2
+share/molden/test/gamess_us.h2o_631g_opt.out
+share/molden/test/gamess_us.irc
+share/molden/test/gamess_us_uhf_opt
+share/molden/test/gaussian.freq
+share/molden/test/gaussian.input
+share/molden/test/gaussian.test
+share/molden/test/jaguar.cube
+share/molden/test/molden.ogl
+share/molden/test/mopac.freq
+share/molden/test/mopac.test
+share/molden/test/pdb.test
+share/molden/test/reacpth.xyz
+share/molden/test/shelx.ins
+share/molden/test/surface.molf
+share/molden/test/test.fdat
+share/molden/test/test.mol2
+share/molden/test/test_homo.cube
+share/molden/test/tinker_charmm.xyz
+share/molden/test/tinker_mm3.xyz
+share/molden/test/uracil.fdat
+share/molden/test/uracil_gauss.out
+share/molden/test/vamp.test
+share/molden/utils/INFO
+share/molden/utils/ch_backspace
+share/molden/utils/ch_mxcon
+share/molden/utils/ch_par
+share/molden/utils/colors
+share/molden/utils/ircextract.awk
+share/molden/utils/molden
+share/molden/utils/multi_vrml.csh
+share/molden/utils/multi_vrml_orbitals.csh
+@dirrm share/molden/utils
+@dirrm share/molden/test
+@dirrm share/molden/doc
+@dirrm share/molden
diff --git a/misc/molden/distinfo b/misc/molden/distinfo
new file mode 100644
index 00000000000..69668949436
--- /dev/null
+++ b/misc/molden/distinfo
@@ -0,0 +1,5 @@
+$NetBSD: distinfo,v 1.1.1.1 2002/05/31 19:15:48 kei Exp $
+
+SHA1 (molden3.7.tar.Z) = e459d53ccb171527a33b335b608362a4fab6131e
+Size (molden3.7.tar.Z) = 3099483 bytes
+SHA1 (patch-aa) = 62168b37335cc74737c2d967234c0e846ab7bfa3
diff --git a/misc/molden/patches/patch-aa b/misc/molden/patches/patch-aa
new file mode 100644
index 00000000000..7ed43ba8fba
--- /dev/null
+++ b/misc/molden/patches/patch-aa
@@ -0,0 +1,25 @@
+$NetBSD: patch-aa,v 1.1.1.1 2002/05/31 19:15:48 kei Exp $
+
+--- makefile.orig Thu Apr 19 20:09:28 2001
++++ makefile Sat Jun 1 01:14:46 2002
+@@ -13,12 +13,16 @@
+ # Disregard compiler warnings on rdmolf.f
+ #
+ CC = cc
+-LIBS = -lX11 -lm
++LIBS = -L${X11BASE}/lib -R${X11BASE}/lib -lX11 -lm
++CFLAGS = -c -I${X11BASE}/include -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0
++FC = g77
++FFLAGS =
++LDR = g77
+
+ # Silicon Graphics
+-CFLAGS = -c -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0
+-FFLAGS =
+-LDR = f77
++#CFLAGS = -c -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0
++#FFLAGS =
++#LDR = f77
+
+ # Ultrix, Dec Alpha, Linux ( and best start for Unix other than below )
+ #