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authoradam <adam>2017-04-29 18:18:52 +0000
committeradam <adam>2017-04-29 18:18:52 +0000
commit07315b2647eb2bb513949f5bb94855c920256739 (patch)
tree578c9cbc5be5b578defebb25a72ac92a0106feb3 /parallel
parentfb51e69dd8aa1fbfd1130e8d702327a86618cd96 (diff)
downloadpkgsrc-07315b2647eb2bb513949f5bb94855c920256739.tar.gz
Changes in 3.2:
* Added support for MPI-3.1 features including nonblocking collective I/O, address manipulation routines, thread-safety for MPI initialization, pre-init functionality, and new MPI_T routines to look up variables by name. * Fortran 2008 bindings are enabled by default and fully supported. * Added support for the Mellanox MXM InfiniBand interface. (thanks to Mellanox for the code contribution). * Added support for the Mellanox HCOLL interface for collectives. (thanks to Mellanox for the code contribution). * Significant stability improvements to the MPICH/portals4 implementation. * Completely revamped RMA infrastructure including several scalability improvements, performance improvements, and bug fixes. * Added experimental support for Open Fabrics Interfaces (OFI) version 1.0.0. https://github.com/ofiwg/libfabric (thanks to Intel for code contribution) * The Myrinet MX network module, which had a life cyle from 1.1 till 3.1.2, has now been deleted. * Several other minor bug fixes, memory leak fixes, and code cleanup.
Diffstat (limited to 'parallel')
-rw-r--r--parallel/mpi-ch/Makefile19
-rw-r--r--parallel/mpi-ch/PLIST490
-rw-r--r--parallel/mpi-ch/PLIST.Darwin4
-rw-r--r--parallel/mpi-ch/buildlink3.mk4
-rw-r--r--parallel/mpi-ch/distinfo20
-rw-r--r--parallel/mpi-ch/options.mk28
-rw-r--r--parallel/mpi-ch/patches/patch-Makefile.in81
-rw-r--r--parallel/mpi-ch/patches/patch-configure16
-rw-r--r--parallel/mpi-ch/patches/patch-src_mpi_romio_configure15
-rw-r--r--parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h16
-rw-r--r--parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c24
-rw-r--r--parallel/mpi-ch/patches/patch-src_pm_hydra_configure4
12 files changed, 562 insertions, 159 deletions
diff --git a/parallel/mpi-ch/Makefile b/parallel/mpi-ch/Makefile
index 8fb484aeb96..00af913a281 100644
--- a/parallel/mpi-ch/Makefile
+++ b/parallel/mpi-ch/Makefile
@@ -1,7 +1,6 @@
-# $NetBSD: Makefile,v 1.82 2016/07/09 06:38:47 wiz Exp $
+# $NetBSD: Makefile,v 1.83 2017/04/29 18:18:52 adam Exp $
-DISTNAME= mpich-3.0.4
-PKGREVISION= 4
+DISTNAME= mpich-3.2
CATEGORIES= parallel
MASTER_SITES= http://www.mpich.org/static/tarballs/${PKGVERSION_NOREV}/
@@ -23,25 +22,28 @@ USE_TOOLS+= perl:run
GNU_CONFIGURE= yes
GNU_CONFIGURE_PREFIX= ${MPI_PREFIX}
CONFIGURE_ARGS+= --datadir=${MPI_PREFIX}/share/${PKGBASE}
-CONFIGURE_ARGS+= --sysconfdir=${PKG_SYSCONFDIR}
CONFIGURE_ARGS+= --docdir=${MPI_PREFIX}/share/doc/${PKGBASE}
CONFIGURE_ARGS+= --htmldir=${MPI_PREFIX}/share/doc/${PKGBASE}/html
-CONFIGURE_ARGS+= --with-openpa-prefix=${BUILDLINK_PREFIX.openpa}
+CONFIGURE_ARGS+= --sysconfdir=${PKG_SYSCONFDIR}
CONFIGURE_ARGS+= --with-hwloc-prefix=${BUILDLINK_PREFIX.hwloc}
+CONFIGURE_ARGS+= --with-openpa-prefix=${BUILDLINK_PREFIX.openpa}
CONFIGURE_ARGS+= --with-pm=hydra:gforker
+CONFIGURE_ARGS+= --with-thread-package=posix
# Make MPI compiler wrapper usable outside pkgsrc:
CONFIGURE_ENV+= WRAPPER_LDFLAGS="-L${MPI_PREFIX}/lib ${COMPILER_RPATH_FLAG}${MPI_PREFIX}/lib"
CONFIGURE_ENV+= MPICH_LDFLAGS="-L${MPI_PREFIX}/lib ${COMPILER_RPATH_FLAG}${MPI_PREFIX}/lib"
+LDFLAGS+= -lm
+
PKG_SYSCONFSUBDIR= mpich
BUILDLINK_PASSTHRU_RPATHDIRS+= ${MPI_PREFIX}/lib
-CONF_FILES+= share/${PKGBASE}/examples/mpicc.conf \
+#CONF_FILES+= share/${PKGBASE}/examples/mpicc.conf \
${PKG_SYSCONFDIR}/mpicc.conf
-CONF_FILES+= share/${PKGBASE}/examples/mpicxx.conf \
+#CONF_FILES+= share/${PKGBASE}/examples/mpicxx.conf \
${PKG_SYSCONFDIR}/mpicxx.conf
-CONF_FILES+= share/${PKGBASE}/examples/mpif77.conf \
+#CONF_FILES+= share/${PKGBASE}/examples/mpif77.conf \
${PKG_SYSCONFDIR}/mpif77.conf
# FreeBSD 6 hack:
@@ -56,4 +58,5 @@ TEST_TARGET= check
.include "../../parallel/hwloc/buildlink3.mk"
.include "../../parallel/openpa/buildlink3.mk"
+.include "../../mk/pthread.buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
diff --git a/parallel/mpi-ch/PLIST b/parallel/mpi-ch/PLIST
index 2a94ddf60d9..2d7e852c07b 100644
--- a/parallel/mpi-ch/PLIST
+++ b/parallel/mpi-ch/PLIST
@@ -1,37 +1,7 @@
-@comment $NetBSD: PLIST,v 1.21 2013/05/10 08:24:57 adam Exp $
+@comment $NetBSD: PLIST,v 1.22 2017/04/29 18:18:52 adam Exp $
bin/hydra_nameserver
bin/hydra_persist
bin/hydra_pmi_proxy
-${PLIST.mpd}bin/mpd
-${PLIST.mpd}bin/mpd.py
-${PLIST.mpd}bin/mpdallexit
-${PLIST.mpd}bin/mpdallexit.py
-${PLIST.mpd}bin/mpdboot
-${PLIST.mpd}bin/mpdboot.py
-${PLIST.mpd}bin/mpdcheck
-${PLIST.mpd}bin/mpdcheck.py
-${PLIST.mpd}bin/mpdchkpyver.py
-${PLIST.mpd}bin/mpdcleanup
-${PLIST.mpd}bin/mpdcleanup.py
-${PLIST.mpd}bin/mpdexit
-${PLIST.mpd}bin/mpdexit.py
-${PLIST.mpd}bin/mpdgdbdrv.py
-${PLIST.mpd}bin/mpdhelp
-${PLIST.mpd}bin/mpdhelp.py
-${PLIST.mpd}bin/mpdkilljob
-${PLIST.mpd}bin/mpdkilljob.py
-${PLIST.mpd}bin/mpdlib.py
-${PLIST.mpd}bin/mpdlistjobs
-${PLIST.mpd}bin/mpdlistjobs.py
-${PLIST.mpd}bin/mpdman.py
-${PLIST.mpd}bin/mpdringtest
-${PLIST.mpd}bin/mpdringtest.py
-${PLIST.mpd}bin/mpdroot
-${PLIST.mpd}bin/mpdrun
-${PLIST.mpd}bin/mpdsigjob
-${PLIST.mpd}bin/mpdsigjob.py
-${PLIST.mpd}bin/mpdtrace
-${PLIST.mpd}bin/mpdtrace.py
bin/mpic++
bin/mpicc
bin/mpichversion
@@ -39,40 +9,52 @@ bin/mpicxx
bin/mpiexec
bin/mpiexec.gforker
bin/mpiexec.hydra
-${PLIST.mpd}bin/mpiexec.mpd
-bin/mpif77
+${PLIST.f90}bin/mpif77
${PLIST.f90}bin/mpif90
+${PLIST.f90}bin/mpifort
bin/mpirun
+bin/mpivars
bin/parkill
include/mpi.h
${PLIST.f90}include/mpi.mod
${PLIST.f90}include/mpi_base.mod
${PLIST.f90}include/mpi_constants.mod
+${PLIST.f90}include/mpi_sizeofs.mod
include/mpicxx.h
-include/mpif.h
+${PLIST.f90}include/mpif.h
include/mpio.h
include/mpiof.h
-${PLIST.f90}include/mpi_sizeofs.mod
-lib/libfmpich.la
-lib/libmpich.la
-lib/libmpichcxx.la
-${PLIST.f90}lib/libmpichf90.la
-lib/libmpl.la
+lib/libfmpich.so
+lib/libmpi.la
+lib/libmpich.so
+lib/libmpichcxx.so
+lib/libmpichf90.so
+lib/libmpicxx.la
+${PLIST.f90}lib/libmpifort.la
+lib/libmpl.so
+lib/libopa.so
lib/pkgconfig/mpich.pc
+man/man1/hydra_nameserver.1
+man/man1/hydra_persist.1
+man/man1/hydra_pmi_proxy.1
man/man1/mpicc.1
man/man1/mpicxx.1
man/man1/mpiexec.1
man/man1/mpif77.1
-man/man1/mpif90.1
-man/man3/MPIX_Comm_group_failed.3
-man/man3/MPIX_Comm_reenable_anysource.3
-man/man3/MPIX_Comm_remote_group_failed.3
+man/man1/mpifort.1
+man/man3/MPIX_Comm_agree.3
+man/man3/MPIX_Comm_failure_ack.3
+man/man3/MPIX_Comm_failure_get_acked.3
+man/man3/MPIX_Comm_revoke.3
+man/man3/MPIX_Comm_shrink.3
man/man3/MPI_Abort.3
man/man3/MPI_Accumulate.3
man/man3/MPI_Add_error_class.3
man/man3/MPI_Add_error_code.3
man/man3/MPI_Add_error_string.3
man/man3/MPI_Address.3
+man/man3/MPI_Aint_add.3
+man/man3/MPI_Aint_diff.3
man/man3/MPI_Allgather.3
man/man3/MPI_Allgatherv.3
man/man3/MPI_Alloc_mem.3
@@ -166,10 +148,14 @@ man/man3/MPI_File_get_size.3
man/man3/MPI_File_get_type_extent.3
man/man3/MPI_File_get_view.3
man/man3/MPI_File_iread.3
+man/man3/MPI_File_iread_all.3
man/man3/MPI_File_iread_at.3
+man/man3/MPI_File_iread_at_all.3
man/man3/MPI_File_iread_shared.3
man/man3/MPI_File_iwrite.3
+man/man3/MPI_File_iwrite_all.3
man/man3/MPI_File_iwrite_at.3
+man/man3/MPI_File_iwrite_at_all.3
man/man3/MPI_File_iwrite_shared.3
man/man3/MPI_File_open.3
man/man3/MPI_File_preallocate.3
@@ -339,9 +325,11 @@ man/man3/MPI_Status_set_elements_x.3
man/man3/MPI_T_category_changed.3
man/man3/MPI_T_category_get_categories.3
man/man3/MPI_T_category_get_cvars.3
+man/man3/MPI_T_category_get_index.3
man/man3/MPI_T_category_get_info.3
man/man3/MPI_T_category_get_num.3
man/man3/MPI_T_category_get_pvars.3
+man/man3/MPI_T_cvar_get_index.3
man/man3/MPI_T_cvar_get_info.3
man/man3/MPI_T_cvar_get_num.3
man/man3/MPI_T_cvar_handle_alloc.3
@@ -352,6 +340,7 @@ man/man3/MPI_T_enum_get_info.3
man/man3/MPI_T_enum_get_item.3
man/man3/MPI_T_finalize.3
man/man3/MPI_T_init_thread.3
+man/man3/MPI_T_pvar_get_index.3
man/man3/MPI_T_pvar_get_info.3
man/man3/MPI_T_pvar_get_num.3
man/man3/MPI_T_pvar_handle_alloc.3
@@ -452,11 +441,414 @@ man/man3/MPI_Win_unlock_all.3
man/man3/MPI_Win_wait.3
man/man3/MPI_Wtick.3
man/man3/MPI_Wtime.3
+share/doc/mpich/html/index.html
+share/doc/mpich/html/www1/index.htm
+share/doc/mpich/html/www1/mpicc.html
+share/doc/mpich/html/www1/mpicxx.html
+share/doc/mpich/html/www1/mpiexec.html
+share/doc/mpich/html/www1/mpif77.html
+share/doc/mpich/html/www1/mpifort.html
+share/doc/mpich/html/www3/MPIX_Comm_agree.html
+share/doc/mpich/html/www3/MPIX_Comm_failure_ack.html
+share/doc/mpich/html/www3/MPIX_Comm_failure_get_acked.html
+share/doc/mpich/html/www3/MPIX_Comm_revoke.html
+share/doc/mpich/html/www3/MPIX_Comm_shrink.html
+share/doc/mpich/html/www3/MPI_Abort.html
+share/doc/mpich/html/www3/MPI_Accumulate.html
+share/doc/mpich/html/www3/MPI_Add_error_class.html
+share/doc/mpich/html/www3/MPI_Add_error_code.html
+share/doc/mpich/html/www3/MPI_Add_error_string.html
+share/doc/mpich/html/www3/MPI_Address.html
+share/doc/mpich/html/www3/MPI_Aint_add.html
+share/doc/mpich/html/www3/MPI_Aint_diff.html
+share/doc/mpich/html/www3/MPI_Allgather.html
+share/doc/mpich/html/www3/MPI_Allgatherv.html
+share/doc/mpich/html/www3/MPI_Alloc_mem.html
+share/doc/mpich/html/www3/MPI_Allreduce.html
+share/doc/mpich/html/www3/MPI_Alltoall.html
+share/doc/mpich/html/www3/MPI_Alltoallv.html
+share/doc/mpich/html/www3/MPI_Alltoallw.html
+share/doc/mpich/html/www3/MPI_Attr_delete.html
+share/doc/mpich/html/www3/MPI_Attr_get.html
+share/doc/mpich/html/www3/MPI_Attr_put.html
+share/doc/mpich/html/www3/MPI_Barrier.html
+share/doc/mpich/html/www3/MPI_Bcast.html
+share/doc/mpich/html/www3/MPI_Bsend.html
+share/doc/mpich/html/www3/MPI_Bsend_init.html
+share/doc/mpich/html/www3/MPI_Buffer_attach.html
+share/doc/mpich/html/www3/MPI_Buffer_detach.html
+share/doc/mpich/html/www3/MPI_Cancel.html
+share/doc/mpich/html/www3/MPI_Cart_coords.html
+share/doc/mpich/html/www3/MPI_Cart_create.html
+share/doc/mpich/html/www3/MPI_Cart_get.html
+share/doc/mpich/html/www3/MPI_Cart_map.html
+share/doc/mpich/html/www3/MPI_Cart_rank.html
+share/doc/mpich/html/www3/MPI_Cart_shift.html
+share/doc/mpich/html/www3/MPI_Cart_sub.html
+share/doc/mpich/html/www3/MPI_Cartdim_get.html
+share/doc/mpich/html/www3/MPI_Close_port.html
+share/doc/mpich/html/www3/MPI_Comm_accept.html
+share/doc/mpich/html/www3/MPI_Comm_call_errhandler.html
+share/doc/mpich/html/www3/MPI_Comm_compare.html
+share/doc/mpich/html/www3/MPI_Comm_connect.html
+share/doc/mpich/html/www3/MPI_Comm_create.html
+share/doc/mpich/html/www3/MPI_Comm_create_errhandler.html
+share/doc/mpich/html/www3/MPI_Comm_create_group.html
+share/doc/mpich/html/www3/MPI_Comm_create_keyval.html
+share/doc/mpich/html/www3/MPI_Comm_delete_attr.html
+share/doc/mpich/html/www3/MPI_Comm_disconnect.html
+share/doc/mpich/html/www3/MPI_Comm_dup.html
+share/doc/mpich/html/www3/MPI_Comm_dup_with_info.html
+share/doc/mpich/html/www3/MPI_Comm_free.html
+share/doc/mpich/html/www3/MPI_Comm_free_keyval.html
+share/doc/mpich/html/www3/MPI_Comm_get_attr.html
+share/doc/mpich/html/www3/MPI_Comm_get_errhandler.html
+share/doc/mpich/html/www3/MPI_Comm_get_info.html
+share/doc/mpich/html/www3/MPI_Comm_get_name.html
+share/doc/mpich/html/www3/MPI_Comm_get_parent.html
+share/doc/mpich/html/www3/MPI_Comm_group.html
+share/doc/mpich/html/www3/MPI_Comm_idup.html
+share/doc/mpich/html/www3/MPI_Comm_join.html
+share/doc/mpich/html/www3/MPI_Comm_rank.html
+share/doc/mpich/html/www3/MPI_Comm_remote_group.html
+share/doc/mpich/html/www3/MPI_Comm_remote_size.html
+share/doc/mpich/html/www3/MPI_Comm_set_attr.html
+share/doc/mpich/html/www3/MPI_Comm_set_errhandler.html
+share/doc/mpich/html/www3/MPI_Comm_set_info.html
+share/doc/mpich/html/www3/MPI_Comm_set_name.html
+share/doc/mpich/html/www3/MPI_Comm_size.html
+share/doc/mpich/html/www3/MPI_Comm_spawn.html
+share/doc/mpich/html/www3/MPI_Comm_spawn_multiple.html
+share/doc/mpich/html/www3/MPI_Comm_split.html
+share/doc/mpich/html/www3/MPI_Comm_split_type.html
+share/doc/mpich/html/www3/MPI_Comm_test_inter.html
+share/doc/mpich/html/www3/MPI_Compare_and_swap.html
+share/doc/mpich/html/www3/MPI_Dims_create.html
+share/doc/mpich/html/www3/MPI_Dist_graph_create.html
+share/doc/mpich/html/www3/MPI_Dist_graph_create_adjacent.html
+share/doc/mpich/html/www3/MPI_Dist_graph_neighbors.html
+share/doc/mpich/html/www3/MPI_Dist_graph_neighbors_count.html
+share/doc/mpich/html/www3/MPI_Errhandler_create.html
+share/doc/mpich/html/www3/MPI_Errhandler_free.html
+share/doc/mpich/html/www3/MPI_Errhandler_get.html
+share/doc/mpich/html/www3/MPI_Errhandler_set.html
+share/doc/mpich/html/www3/MPI_Error_class.html
+share/doc/mpich/html/www3/MPI_Error_string.html
+share/doc/mpich/html/www3/MPI_Exscan.html
+share/doc/mpich/html/www3/MPI_Fetch_and_op.html
+share/doc/mpich/html/www3/MPI_File_c2f.html
+share/doc/mpich/html/www3/MPI_File_call_errhandler.html
+share/doc/mpich/html/www3/MPI_File_close.html
+share/doc/mpich/html/www3/MPI_File_create_errhandler.html
+share/doc/mpich/html/www3/MPI_File_delete.html
+share/doc/mpich/html/www3/MPI_File_f2c.html
+share/doc/mpich/html/www3/MPI_File_get_amode.html
+share/doc/mpich/html/www3/MPI_File_get_atomicity.html
+share/doc/mpich/html/www3/MPI_File_get_byte_offset.html
+share/doc/mpich/html/www3/MPI_File_get_errhandler.html
+share/doc/mpich/html/www3/MPI_File_get_group.html
+share/doc/mpich/html/www3/MPI_File_get_info.html
+share/doc/mpich/html/www3/MPI_File_get_position.html
+share/doc/mpich/html/www3/MPI_File_get_position_shared.html
+share/doc/mpich/html/www3/MPI_File_get_size.html
+share/doc/mpich/html/www3/MPI_File_get_type_extent.html
+share/doc/mpich/html/www3/MPI_File_get_view.html
+share/doc/mpich/html/www3/MPI_File_iread.html
+share/doc/mpich/html/www3/MPI_File_iread_all.html
+share/doc/mpich/html/www3/MPI_File_iread_at.html
+share/doc/mpich/html/www3/MPI_File_iread_at_all.html
+share/doc/mpich/html/www3/MPI_File_iread_shared.html
+share/doc/mpich/html/www3/MPI_File_iwrite.html
+share/doc/mpich/html/www3/MPI_File_iwrite_all.html
+share/doc/mpich/html/www3/MPI_File_iwrite_at.html
+share/doc/mpich/html/www3/MPI_File_iwrite_at_all.html
+share/doc/mpich/html/www3/MPI_File_iwrite_shared.html
+share/doc/mpich/html/www3/MPI_File_open.html
+share/doc/mpich/html/www3/MPI_File_preallocate.html
+share/doc/mpich/html/www3/MPI_File_read.html
+share/doc/mpich/html/www3/MPI_File_read_all.html
+share/doc/mpich/html/www3/MPI_File_read_all_begin.html
+share/doc/mpich/html/www3/MPI_File_read_all_end.html
+share/doc/mpich/html/www3/MPI_File_read_at.html
+share/doc/mpich/html/www3/MPI_File_read_at_all.html
+share/doc/mpich/html/www3/MPI_File_read_at_all_begin.html
+share/doc/mpich/html/www3/MPI_File_read_at_all_end.html
+share/doc/mpich/html/www3/MPI_File_read_ordered.html
+share/doc/mpich/html/www3/MPI_File_read_ordered_begin.html
+share/doc/mpich/html/www3/MPI_File_read_ordered_end.html
+share/doc/mpich/html/www3/MPI_File_read_shared.html
+share/doc/mpich/html/www3/MPI_File_seek.html
+share/doc/mpich/html/www3/MPI_File_seek_shared.html
+share/doc/mpich/html/www3/MPI_File_set_atomicity.html
+share/doc/mpich/html/www3/MPI_File_set_errhandler.html
+share/doc/mpich/html/www3/MPI_File_set_info.html
+share/doc/mpich/html/www3/MPI_File_set_size.html
+share/doc/mpich/html/www3/MPI_File_set_view.html
+share/doc/mpich/html/www3/MPI_File_sync.html
+share/doc/mpich/html/www3/MPI_File_write.html
+share/doc/mpich/html/www3/MPI_File_write_all.html
+share/doc/mpich/html/www3/MPI_File_write_all_begin.html
+share/doc/mpich/html/www3/MPI_File_write_all_end.html
+share/doc/mpich/html/www3/MPI_File_write_at.html
+share/doc/mpich/html/www3/MPI_File_write_at_all.html
+share/doc/mpich/html/www3/MPI_File_write_at_all_begin.html
+share/doc/mpich/html/www3/MPI_File_write_at_all_end.html
+share/doc/mpich/html/www3/MPI_File_write_ordered.html
+share/doc/mpich/html/www3/MPI_File_write_ordered_begin.html
+share/doc/mpich/html/www3/MPI_File_write_ordered_end.html
+share/doc/mpich/html/www3/MPI_File_write_shared.html
+share/doc/mpich/html/www3/MPI_Finalize.html
+share/doc/mpich/html/www3/MPI_Finalized.html
+share/doc/mpich/html/www3/MPI_Free_mem.html
+share/doc/mpich/html/www3/MPI_Gather.html
+share/doc/mpich/html/www3/MPI_Gatherv.html
+share/doc/mpich/html/www3/MPI_Get.html
+share/doc/mpich/html/www3/MPI_Get_accumulate.html
+share/doc/mpich/html/www3/MPI_Get_address.html
+share/doc/mpich/html/www3/MPI_Get_count.html
+share/doc/mpich/html/www3/MPI_Get_elements.html
+share/doc/mpich/html/www3/MPI_Get_elements_x.html
+share/doc/mpich/html/www3/MPI_Get_library_version.html
+share/doc/mpich/html/www3/MPI_Get_processor_name.html
+share/doc/mpich/html/www3/MPI_Get_version.html
+share/doc/mpich/html/www3/MPI_Graph_create.html
+share/doc/mpich/html/www3/MPI_Graph_get.html
+share/doc/mpich/html/www3/MPI_Graph_map.html
+share/doc/mpich/html/www3/MPI_Graph_neighbors.html
+share/doc/mpich/html/www3/MPI_Graph_neighbors_count.html
+share/doc/mpich/html/www3/MPI_Graphdims_get.html
+share/doc/mpich/html/www3/MPI_Grequest_complete.html
+share/doc/mpich/html/www3/MPI_Grequest_start.html
+share/doc/mpich/html/www3/MPI_Group_compare.html
+share/doc/mpich/html/www3/MPI_Group_difference.html
+share/doc/mpich/html/www3/MPI_Group_excl.html
+share/doc/mpich/html/www3/MPI_Group_free.html
+share/doc/mpich/html/www3/MPI_Group_incl.html
+share/doc/mpich/html/www3/MPI_Group_intersection.html
+share/doc/mpich/html/www3/MPI_Group_range_excl.html
+share/doc/mpich/html/www3/MPI_Group_range_incl.html
+share/doc/mpich/html/www3/MPI_Group_rank.html
+share/doc/mpich/html/www3/MPI_Group_size.html
+share/doc/mpich/html/www3/MPI_Group_translate_ranks.html
+share/doc/mpich/html/www3/MPI_Group_union.html
+share/doc/mpich/html/www3/MPI_Iallgather.html
+share/doc/mpich/html/www3/MPI_Iallgatherv.html
+share/doc/mpich/html/www3/MPI_Iallreduce.html
+share/doc/mpich/html/www3/MPI_Ialltoall.html
+share/doc/mpich/html/www3/MPI_Ialltoallv.html
+share/doc/mpich/html/www3/MPI_Ialltoallw.html
+share/doc/mpich/html/www3/MPI_Ibarrier.html
+share/doc/mpich/html/www3/MPI_Ibcast.html
+share/doc/mpich/html/www3/MPI_Ibsend.html
+share/doc/mpich/html/www3/MPI_Iexscan.html
+share/doc/mpich/html/www3/MPI_Igather.html
+share/doc/mpich/html/www3/MPI_Igatherv.html
+share/doc/mpich/html/www3/MPI_Improbe.html
+share/doc/mpich/html/www3/MPI_Imrecv.html
+share/doc/mpich/html/www3/MPI_Ineighbor_allgather.html
+share/doc/mpich/html/www3/MPI_Ineighbor_allgatherv.html
+share/doc/mpich/html/www3/MPI_Ineighbor_alltoall.html
+share/doc/mpich/html/www3/MPI_Ineighbor_alltoallv.html
+share/doc/mpich/html/www3/MPI_Ineighbor_alltoallw.html
+share/doc/mpich/html/www3/MPI_Info_create.html
+share/doc/mpich/html/www3/MPI_Info_delete.html
+share/doc/mpich/html/www3/MPI_Info_dup.html
+share/doc/mpich/html/www3/MPI_Info_free.html
+share/doc/mpich/html/www3/MPI_Info_get.html
+share/doc/mpich/html/www3/MPI_Info_get_nkeys.html
+share/doc/mpich/html/www3/MPI_Info_get_nthkey.html
+share/doc/mpich/html/www3/MPI_Info_get_valuelen.html
+share/doc/mpich/html/www3/MPI_Info_set.html
+share/doc/mpich/html/www3/MPI_Init.html
+share/doc/mpich/html/www3/MPI_Init_thread.html
+share/doc/mpich/html/www3/MPI_Initialized.html
+share/doc/mpich/html/www3/MPI_Intercomm_create.html
+share/doc/mpich/html/www3/MPI_Intercomm_merge.html
+share/doc/mpich/html/www3/MPI_Iprobe.html
+share/doc/mpich/html/www3/MPI_Irecv.html
+share/doc/mpich/html/www3/MPI_Ireduce.html
+share/doc/mpich/html/www3/MPI_Ireduce_scatter.html
+share/doc/mpich/html/www3/MPI_Ireduce_scatter_block.html
+share/doc/mpich/html/www3/MPI_Irsend.html
+share/doc/mpich/html/www3/MPI_Is_thread_main.html
+share/doc/mpich/html/www3/MPI_Iscan.html
+share/doc/mpich/html/www3/MPI_Iscatter.html
+share/doc/mpich/html/www3/MPI_Iscatterv.html
+share/doc/mpich/html/www3/MPI_Isend.html
+share/doc/mpich/html/www3/MPI_Issend.html
+share/doc/mpich/html/www3/MPI_Keyval_create.html
+share/doc/mpich/html/www3/MPI_Keyval_free.html
+share/doc/mpich/html/www3/MPI_Lookup_name.html
+share/doc/mpich/html/www3/MPI_Mprobe.html
+share/doc/mpich/html/www3/MPI_Mrecv.html
+share/doc/mpich/html/www3/MPI_Neighbor_allgather.html
+share/doc/mpich/html/www3/MPI_Neighbor_allgatherv.html
+share/doc/mpich/html/www3/MPI_Neighbor_alltoall.html
+share/doc/mpich/html/www3/MPI_Neighbor_alltoallv.html
+share/doc/mpich/html/www3/MPI_Neighbor_alltoallw.html
+share/doc/mpich/html/www3/MPI_Op_commute.html
+share/doc/mpich/html/www3/MPI_Op_create.html
+share/doc/mpich/html/www3/MPI_Op_free.html
+share/doc/mpich/html/www3/MPI_Open_port.html
+share/doc/mpich/html/www3/MPI_Pack.html
+share/doc/mpich/html/www3/MPI_Pack_external.html
+share/doc/mpich/html/www3/MPI_Pack_external_size.html
+share/doc/mpich/html/www3/MPI_Pack_size.html
+share/doc/mpich/html/www3/MPI_Pcontrol.html
+share/doc/mpich/html/www3/MPI_Probe.html
+share/doc/mpich/html/www3/MPI_Publish_name.html
+share/doc/mpich/html/www3/MPI_Put.html
+share/doc/mpich/html/www3/MPI_Query_thread.html
+share/doc/mpich/html/www3/MPI_Raccumulate.html
+share/doc/mpich/html/www3/MPI_Recv.html
+share/doc/mpich/html/www3/MPI_Recv_init.html
+share/doc/mpich/html/www3/MPI_Reduce.html
+share/doc/mpich/html/www3/MPI_Reduce_local.html
+share/doc/mpich/html/www3/MPI_Reduce_scatter.html
+share/doc/mpich/html/www3/MPI_Reduce_scatter_block.html
+share/doc/mpich/html/www3/MPI_Register_datarep.html
+share/doc/mpich/html/www3/MPI_Request_free.html
+share/doc/mpich/html/www3/MPI_Request_get_status.html
+share/doc/mpich/html/www3/MPI_Rget.html
+share/doc/mpich/html/www3/MPI_Rget_accumulate.html
+share/doc/mpich/html/www3/MPI_Rput.html
+share/doc/mpich/html/www3/MPI_Rsend.html
+share/doc/mpich/html/www3/MPI_Rsend_init.html
+share/doc/mpich/html/www3/MPI_Scan.html
+share/doc/mpich/html/www3/MPI_Scatter.html
+share/doc/mpich/html/www3/MPI_Scatterv.html
+share/doc/mpich/html/www3/MPI_Send.html
+share/doc/mpich/html/www3/MPI_Send_init.html
+share/doc/mpich/html/www3/MPI_Sendrecv.html
+share/doc/mpich/html/www3/MPI_Sendrecv_replace.html
+share/doc/mpich/html/www3/MPI_Ssend.html
+share/doc/mpich/html/www3/MPI_Ssend_init.html
+share/doc/mpich/html/www3/MPI_Start.html
+share/doc/mpich/html/www3/MPI_Startall.html
+share/doc/mpich/html/www3/MPI_Status_set_cancelled.html
+share/doc/mpich/html/www3/MPI_Status_set_elements.html
+share/doc/mpich/html/www3/MPI_Status_set_elements_x.html
+share/doc/mpich/html/www3/MPI_T_category_changed.html
+share/doc/mpich/html/www3/MPI_T_category_get_categories.html
+share/doc/mpich/html/www3/MPI_T_category_get_cvars.html
+share/doc/mpich/html/www3/MPI_T_category_get_index.html
+share/doc/mpich/html/www3/MPI_T_category_get_info.html
+share/doc/mpich/html/www3/MPI_T_category_get_num.html
+share/doc/mpich/html/www3/MPI_T_category_get_pvars.html
+share/doc/mpich/html/www3/MPI_T_cvar_get_index.html
+share/doc/mpich/html/www3/MPI_T_cvar_get_info.html
+share/doc/mpich/html/www3/MPI_T_cvar_get_num.html
+share/doc/mpich/html/www3/MPI_T_cvar_handle_alloc.html
+share/doc/mpich/html/www3/MPI_T_cvar_handle_free.html
+share/doc/mpich/html/www3/MPI_T_cvar_read.html
+share/doc/mpich/html/www3/MPI_T_cvar_write.html
+share/doc/mpich/html/www3/MPI_T_enum_get_info.html
+share/doc/mpich/html/www3/MPI_T_enum_get_item.html
+share/doc/mpich/html/www3/MPI_T_finalize.html
+share/doc/mpich/html/www3/MPI_T_init_thread.html
+share/doc/mpich/html/www3/MPI_T_pvar_get_index.html
+share/doc/mpich/html/www3/MPI_T_pvar_get_info.html
+share/doc/mpich/html/www3/MPI_T_pvar_get_num.html
+share/doc/mpich/html/www3/MPI_T_pvar_handle_alloc.html
+share/doc/mpich/html/www3/MPI_T_pvar_handle_free.html
+share/doc/mpich/html/www3/MPI_T_pvar_read.html
+share/doc/mpich/html/www3/MPI_T_pvar_readreset.html
+share/doc/mpich/html/www3/MPI_T_pvar_reset.html
+share/doc/mpich/html/www3/MPI_T_pvar_session_create.html
+share/doc/mpich/html/www3/MPI_T_pvar_session_free.html
+share/doc/mpich/html/www3/MPI_T_pvar_start.html
+share/doc/mpich/html/www3/MPI_T_pvar_stop.html
+share/doc/mpich/html/www3/MPI_T_pvar_write.html
+share/doc/mpich/html/www3/MPI_Test.html
+share/doc/mpich/html/www3/MPI_Test_cancelled.html
+share/doc/mpich/html/www3/MPI_Testall.html
+share/doc/mpich/html/www3/MPI_Testany.html
+share/doc/mpich/html/www3/MPI_Testsome.html
+share/doc/mpich/html/www3/MPI_Topo_test.html
+share/doc/mpich/html/www3/MPI_Type_commit.html
+share/doc/mpich/html/www3/MPI_Type_contiguous.html
+share/doc/mpich/html/www3/MPI_Type_create_darray.html
+share/doc/mpich/html/www3/MPI_Type_create_hindexed.html
+share/doc/mpich/html/www3/MPI_Type_create_hindexed_block.html
+share/doc/mpich/html/www3/MPI_Type_create_hvector.html
+share/doc/mpich/html/www3/MPI_Type_create_indexed_block.html
+share/doc/mpich/html/www3/MPI_Type_create_keyval.html
+share/doc/mpich/html/www3/MPI_Type_create_resized.html
+share/doc/mpich/html/www3/MPI_Type_create_struct.html
+share/doc/mpich/html/www3/MPI_Type_create_subarray.html
+share/doc/mpich/html/www3/MPI_Type_delete_attr.html
+share/doc/mpich/html/www3/MPI_Type_dup.html
+share/doc/mpich/html/www3/MPI_Type_extent.html
+share/doc/mpich/html/www3/MPI_Type_free.html
+share/doc/mpich/html/www3/MPI_Type_free_keyval.html
+share/doc/mpich/html/www3/MPI_Type_get_attr.html
+share/doc/mpich/html/www3/MPI_Type_get_contents.html
+share/doc/mpich/html/www3/MPI_Type_get_envelope.html
+share/doc/mpich/html/www3/MPI_Type_get_extent.html
+share/doc/mpich/html/www3/MPI_Type_get_extent_x.html
+share/doc/mpich/html/www3/MPI_Type_get_name.html
+share/doc/mpich/html/www3/MPI_Type_get_true_extent.html
+share/doc/mpich/html/www3/MPI_Type_get_true_extent_x.html
+share/doc/mpich/html/www3/MPI_Type_hindexed.html
+share/doc/mpich/html/www3/MPI_Type_hvector.html
+share/doc/mpich/html/www3/MPI_Type_indexed.html
+share/doc/mpich/html/www3/MPI_Type_lb.html
+share/doc/mpich/html/www3/MPI_Type_match_size.html
+share/doc/mpich/html/www3/MPI_Type_set_attr.html
+share/doc/mpich/html/www3/MPI_Type_set_name.html
+share/doc/mpich/html/www3/MPI_Type_size.html
+share/doc/mpich/html/www3/MPI_Type_size_x.html
+share/doc/mpich/html/www3/MPI_Type_struct.html
+share/doc/mpich/html/www3/MPI_Type_ub.html
+share/doc/mpich/html/www3/MPI_Type_vector.html
+share/doc/mpich/html/www3/MPI_Unpack.html
+share/doc/mpich/html/www3/MPI_Unpack_external.html
+share/doc/mpich/html/www3/MPI_Unpublish_name.html
+share/doc/mpich/html/www3/MPI_Wait.html
+share/doc/mpich/html/www3/MPI_Waitall.html
+share/doc/mpich/html/www3/MPI_Waitany.html
+share/doc/mpich/html/www3/MPI_Waitsome.html
+share/doc/mpich/html/www3/MPI_Win_allocate.html
+share/doc/mpich/html/www3/MPI_Win_allocate_shared.html
+share/doc/mpich/html/www3/MPI_Win_attach.html
+share/doc/mpich/html/www3/MPI_Win_call_errhandler.html
+share/doc/mpich/html/www3/MPI_Win_complete.html
+share/doc/mpich/html/www3/MPI_Win_create.html
+share/doc/mpich/html/www3/MPI_Win_create_dynamic.html
+share/doc/mpich/html/www3/MPI_Win_create_errhandler.html
+share/doc/mpich/html/www3/MPI_Win_create_keyval.html
+share/doc/mpich/html/www3/MPI_Win_delete_attr.html
+share/doc/mpich/html/www3/MPI_Win_detach.html
+share/doc/mpich/html/www3/MPI_Win_fence.html
+share/doc/mpich/html/www3/MPI_Win_flush.html
+share/doc/mpich/html/www3/MPI_Win_flush_all.html
+share/doc/mpich/html/www3/MPI_Win_flush_local.html
+share/doc/mpich/html/www3/MPI_Win_flush_local_all.html
+share/doc/mpich/html/www3/MPI_Win_free.html
+share/doc/mpich/html/www3/MPI_Win_free_keyval.html
+share/doc/mpich/html/www3/MPI_Win_get_attr.html
+share/doc/mpich/html/www3/MPI_Win_get_errhandler.html
+share/doc/mpich/html/www3/MPI_Win_get_group.html
+share/doc/mpich/html/www3/MPI_Win_get_info.html
+share/doc/mpich/html/www3/MPI_Win_get_name.html
+share/doc/mpich/html/www3/MPI_Win_lock.html
+share/doc/mpich/html/www3/MPI_Win_lock_all.html
+share/doc/mpich/html/www3/MPI_Win_post.html
+share/doc/mpich/html/www3/MPI_Win_set_attr.html
+share/doc/mpich/html/www3/MPI_Win_set_errhandler.html
+share/doc/mpich/html/www3/MPI_Win_set_info.html
+share/doc/mpich/html/www3/MPI_Win_set_name.html
+share/doc/mpich/html/www3/MPI_Win_shared_query.html
+share/doc/mpich/html/www3/MPI_Win_start.html
+share/doc/mpich/html/www3/MPI_Win_sync.html
+share/doc/mpich/html/www3/MPI_Win_test.html
+share/doc/mpich/html/www3/MPI_Win_unlock.html
+share/doc/mpich/html/www3/MPI_Win_unlock_all.html
+share/doc/mpich/html/www3/MPI_Win_wait.html
+share/doc/mpich/html/www3/MPI_Wtick.html
+share/doc/mpich/html/www3/MPI_Wtime.html
+share/doc/mpich/html/www3/index.htm
+share/doc/mpich/html/www3/mpi.cit
share/doc/mpich/install.pdf
share/doc/mpich/logging.pdf
-share/doc/mpich/smpd_pmi.pdf
share/doc/mpich/user.pdf
-share/mpich/examples/mpicc.conf
-share/mpich/examples/mpicxx.conf
-share/mpich/examples/mpif77.conf
-${PLIST.f90}share/mpich/examples/mpif90.conf
diff --git a/parallel/mpi-ch/PLIST.Darwin b/parallel/mpi-ch/PLIST.Darwin
index 8bc625a744a..d46c4a459b0 100644
--- a/parallel/mpi-ch/PLIST.Darwin
+++ b/parallel/mpi-ch/PLIST.Darwin
@@ -1,2 +1,2 @@
-@comment $NetBSD: PLIST.Darwin,v 1.1 2013/05/10 08:25:33 adam Exp $
-lib/libpmpich.la
+@comment $NetBSD: PLIST.Darwin,v 1.2 2017/04/29 18:18:52 adam Exp $
+lib/libpmpi.la
diff --git a/parallel/mpi-ch/buildlink3.mk b/parallel/mpi-ch/buildlink3.mk
index df9c0788c48..b5b8d1759f2 100644
--- a/parallel/mpi-ch/buildlink3.mk
+++ b/parallel/mpi-ch/buildlink3.mk
@@ -1,4 +1,4 @@
-# $NetBSD: buildlink3.mk,v 1.18 2015/11/25 12:52:26 jperkin Exp $
+# $NetBSD: buildlink3.mk,v 1.19 2017/04/29 18:18:52 adam Exp $
BUILDLINK_TREE+= mpich
@@ -8,7 +8,7 @@ MPICH_BUILDLINK3_MK:=
BUILDLINK_API_DEPENDS.mpich+= mpich>=3
BUILDLINK_PKGSRCDIR.mpich?= ../../parallel/mpi-ch
-MPI_PREFIX?= $(BUILDLINK_PREFIX.mpich)
+MPI_PREFIX?= ${BUILDLINK_PREFIX.mpich}
.include "../../parallel/openpa/buildlink3.mk"
.endif # MPICH_BUILDLINK3_MK
diff --git a/parallel/mpi-ch/distinfo b/parallel/mpi-ch/distinfo
index fee873b3ba3..a80bc0c7160 100644
--- a/parallel/mpi-ch/distinfo
+++ b/parallel/mpi-ch/distinfo
@@ -1,10 +1,12 @@
-$NetBSD: distinfo,v 1.25 2015/11/02 23:46:12 agc Exp $
+$NetBSD: distinfo,v 1.26 2017/04/29 18:18:52 adam Exp $
-SHA1 (mpich-3.0.4.tar.gz) = e89cc8de89d18d5718f7b881f3835b5a0943f897
-RMD160 (mpich-3.0.4.tar.gz) = c14b3b335be863dd36c0a58630c969719d8ef217
-SHA512 (mpich-3.0.4.tar.gz) = f9d8b2cf561fe5f85c12512ef4dd7b0cf5ec8b53ddb07bfa0d1db2e3c8ae0382c77e0661f46b82ec96b05d18ea2d25328bb84e9528ac06e5925f30ec8ef030d0
-Size (mpich-3.0.4.tar.gz) = 10921075 bytes
-SHA1 (patch-Makefile.in) = 32a78a384ecb94a30631a8a756e746edbe6e0060
-SHA1 (patch-configure) = 0e7fec4d30e33387d8b434c6b4e90bab1daa42ba
-SHA1 (patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h) = e0f3de9c7c229fee3de5e85e589b88987ef11a11
-SHA1 (patch-src_pm_hydra_configure) = c8d25676499386e4a2616db5ab2d86443f29b1f7
+SHA1 (mpich-3.2.tar.gz) = 5fae7df02f750b6966837b554f9985a9c574236f
+RMD160 (mpich-3.2.tar.gz) = d7180d5129fe313830504e1d59c3b37831554bee
+SHA512 (mpich-3.2.tar.gz) = 083c51655b4355827bd7fa4fe528046e2bc77b7747d869ff87b79fa324c3cc2a9b5640ccb7271490ccc0dd627e354a33a449bbab448501bbfddcfe5f999ee717
+Size (mpich-3.2.tar.gz) = 11862150 bytes
+SHA1 (patch-Makefile.in) = 5f98d902eae4102f283ddb1721e4d089d8a81779
+SHA1 (patch-configure) = 00c5706f825dbadeb544d14ee98a1a27e49d0797
+SHA1 (patch-src_mpi_romio_configure) = a517932dd1af1cc0da889b838fd732a5fb766910
+SHA1 (patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h) = ec7d063fb22fbfb3fc1ee85197afd6f4c4db22bd
+SHA1 (patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c) = ddc3fe79eecabf81b7b092ccaa91c39fa19b29dc
+SHA1 (patch-src_pm_hydra_configure) = 814abcb0c6424ae9a1718c016e5b0a7f3ad85e59
diff --git a/parallel/mpi-ch/options.mk b/parallel/mpi-ch/options.mk
index fa2d627b2a7..86327bd363e 100644
--- a/parallel/mpi-ch/options.mk
+++ b/parallel/mpi-ch/options.mk
@@ -1,12 +1,11 @@
-# $NetBSD: options.mk,v 1.3 2013/05/10 08:24:57 adam Exp $
+# $NetBSD: options.mk,v 1.4 2017/04/29 18:18:52 adam Exp $
PKG_OPTIONS_VAR= PKG_OPTIONS.mpich
-PKG_SUPPORTED_OPTIONS= debug f90 mpich-mpd threads
-PKG_SUGGESTED_OPTIONS= threads
+PKG_SUPPORTED_OPTIONS= debug f90
.include "../../mk/bsd.options.mk"
-PLIST_VARS+= f90 mpd
+PLIST_VARS+= f90
.if !empty(PKG_OPTIONS:Mdebug)
CONFIGURE_ARGS+= --enable-g=debug # problems
@@ -15,23 +14,10 @@ INSTALL_UNSTRIPPED= yes
.if !empty(PKG_OPTIONS:Mf90)
USE_LANGUAGES+= fortran
+CONFIGURE_ARGS+= --enable-fortran=yes
PLIST.f90= yes
.else
-USE_LANGUAGES+= fortran77
-CONFIGURE_ARGS+= --disable-fc
-.endif
-
-.if !empty(PKG_OPTIONS:Mthreads)
-CONFIGURE_ARGS+= --with-thread-package=posix # aka pthreads
-.include "../../mk/pthread.buildlink3.mk"
-.endif
-
-# Allow coexistance of MPICH2 and musicpd by disabling MPICH2 parts:
-.if !empty(PKG_OPTIONS:Mmpich-mpd)
-CONFLICTS+= musicpd-[0-9]* # installs bin/mpd
-CONFIGURE_ARGS+= --with-pm=hydra:mpd:gforker
-CONFIGURE_ARGS+= --with-python=python${PYVERSSUFFIX}
-PLIST.mpd= yes
-REPLACE_PYTHON+= src/pm/mpd/*.py src/pm/mpd/test/*.py
-.include "../../lang/python/application.mk"
+#USE_LANGUAGES+= fortran77
+#CONFIGURE_ARGS+= --enable-fortran=f77
+CONFIGURE_ARGS+= --enable-fortran=no
.endif
diff --git a/parallel/mpi-ch/patches/patch-Makefile.in b/parallel/mpi-ch/patches/patch-Makefile.in
index d977e34b051..8069db46e55 100644
--- a/parallel/mpi-ch/patches/patch-Makefile.in
+++ b/parallel/mpi-ch/patches/patch-Makefile.in
@@ -1,57 +1,26 @@
-$NetBSD: patch-Makefile.in,v 1.2 2013/03/17 17:08:51 asau Exp $
+$NetBSD: patch-Makefile.in,v 1.3 2017/04/29 18:18:52 adam Exp $
---- Makefile.in.orig 2012-12-20 21:29:15.000000000 +0100
-+++ Makefile.in 2013-01-24 16:33:41.164187741 +0100
-@@ -5985,6 +5985,7 @@
- srcdir = @srcdir@
- subdirs = @subdirs@
- sysconfdir = @sysconfdir@
-+sysconfexampledir = ${datadir}/examples
- target_alias = @target_alias@
- top_build_prefix = @top_build_prefix@
- top_builddir = @top_builddir@
-@@ -6163,9 +6164,9 @@
- src/mpid/ch3/errnames.txt $(am__append_52) \
- src/mpid/common/sock/errnames.txt $(am__append_87) \
- src/pmi/errnames.txt
--external_subdirs = src/mpl src/openpa
-+external_subdirs = src/mpl # src/openpa
- # FIXME how/where does external_libs/ldflags get used?
--external_ldflags = -L$(top_builddir)/src/mpl -L$(top_builddir)/src/openpa/src
-+external_ldflags = -L$(top_builddir)/src/mpl # -L$(top_builddir)/src/openpa/src
- external_libs = -lmpl -lopa $(am__append_12) $(am__append_13)
-
- # NOTE on our semi-unconventional usage of DIST_SUBDIRS:
-@@ -23542,25 +23543,25 @@
- dir='$(DESTDIR)$(pkgconfigdir)'; $(am__uninstall_files_from_dir)
- install-sysconfDATA: $(sysconf_DATA)
- @$(NORMAL_INSTALL)
-- @list='$(sysconf_DATA)'; test -n "$(sysconfdir)" || list=; \
-+ @list='$(sysconf_DATA)'; test -n "$(sysconfexampledir)" || list=; \
- if test -n "$$list"; then \
-- echo " $(MKDIR_P) '$(DESTDIR)$(sysconfdir)'"; \
-- $(MKDIR_P) "$(DESTDIR)$(sysconfdir)" || exit 1; \
-+ echo " $(MKDIR_P) '$(DESTDIR)$(sysconfexampledir)'"; \
-+ $(MKDIR_P) "$(DESTDIR)$(sysconfexampledir)" || exit 1; \
- fi; \
- for p in $$list; do \
- if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
- echo "$$d$$p"; \
- done | $(am__base_list) | \
- while read files; do \
-- echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(sysconfdir)'"; \
-- $(INSTALL_DATA) $$files "$(DESTDIR)$(sysconfdir)" || exit $$?; \
-+ echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(sysconfexampledir)'"; \
-+ $(INSTALL_DATA) $$files "$(DESTDIR)$(sysconfexampledir)" || exit $$?; \
- done
-
- uninstall-sysconfDATA:
- @$(NORMAL_UNINSTALL)
-- @list='$(sysconf_DATA)'; test -n "$(sysconfdir)" || list=; \
-+ @list='$(sysconf_DATA)'; test -n "$(sysconfexampledir)" || list=; \
- files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
-- dir='$(DESTDIR)$(sysconfdir)'; $(am__uninstall_files_from_dir)
-+ dir='$(DESTDIR)$(sysconfexampledir)'; $(am__uninstall_files_from_dir)
- install-includeHEADERS: $(include_HEADERS)
- @$(NORMAL_INSTALL)
- @list='$(include_HEADERS)'; test -n "$(includedir)" || list=; \
+Link mpiexec.gforker also against mpllib.
+Do not create libopa symlink; it conflicts with parallel/openpa/PLIST.
+
+--- Makefile.in.orig 2015-11-12 04:08:10.000000000 +0000
++++ Makefile.in
+@@ -10241,7 +10242,7 @@ common_pm_includes = \
+ # we may not want to add AM_CPPFLAGS for this program
+ @BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_TRUE@src_pm_gforker_mpiexec_CPPFLAGS = $(common_pm_includes) $(AM_CPPFLAGS)
+ @BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_FALSE@src_pm_gforker_mpiexec_gforker_SOURCES = src/pm/gforker/mpiexec.c
+-@BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_FALSE@src_pm_gforker_mpiexec_gforker_LDADD = src/pm/util/libmpiexec.a
++@BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_FALSE@src_pm_gforker_mpiexec_gforker_LDADD = src/pm/util/libmpiexec.a $(mpllib)
+ # we may not want to add AM_CPPFLAGS for this program
+ @BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_FALSE@src_pm_gforker_mpiexec_gforker_CPPFLAGS = $(common_pm_includes) $(AM_CPPFLAGS)
+ @BUILD_PM_REMSHELL_TRUE@@PRIMARY_PM_REMSHELL_TRUE@src_pm_remshell_mpiexec_SOURCES = src/pm/remshell/mpiexec.c
+@@ -39783,9 +39784,6 @@ install-exec-hook:
+ if test "@MPILIBNAME@" != "mpl" ; then \
+ cd ${DESTDIR}${libdir} && ln -f -s lib@MPILIBNAME@@SHLIB_EXT@ libmpl@SHLIB_EXT@ ; \
+ fi ; \
+- if test "@MPILIBNAME@" != "opa" ; then \
+- cd ${DESTDIR}${libdir} && ln -f -s lib@MPILIBNAME@@SHLIB_EXT@ libopa@SHLIB_EXT@ ; \
+- fi ; \
+ if test "@MPILIBNAME@" != "mpich" ; then \
+ cd ${DESTDIR}${libdir} && ln -f -s lib@MPILIBNAME@@SHLIB_EXT@ libmpich@SHLIB_EXT@ ; \
+ fi ; \
diff --git a/parallel/mpi-ch/patches/patch-configure b/parallel/mpi-ch/patches/patch-configure
index 049b93324ac..5a3fad1fbb6 100644
--- a/parallel/mpi-ch/patches/patch-configure
+++ b/parallel/mpi-ch/patches/patch-configure
@@ -1,10 +1,20 @@
-$NetBSD: patch-configure,v 1.1 2013/04/20 17:39:01 asau Exp $
+$NetBSD: patch-configure,v 1.2 2017/04/29 18:18:52 adam Exp $
+Portability fix.
Make it use weak symbols with Clang.
---- configure.orig 2013-03-28 21:03:38.000000000 +0000
+--- configure.orig 2015-11-12 04:08:11.000000000 +0000
+++ configure
-@@ -27768,7 +27768,9 @@ else
+@@ -26437,7 +26437,7 @@ if test -z "$BUILD_PAMID_TRUE"; then :
+
+
+ pamid_platform=${device_args}
+-if test x"$pamid_platform" == "x"; then
++if test x"$pamid_platform" = "x"; then
+ case $host in #(
+ *-bgq-*) :
+ pamid_platform=BGQ ;; #(
+@@ -29322,7 +29322,9 @@ else
cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
diff --git a/parallel/mpi-ch/patches/patch-src_mpi_romio_configure b/parallel/mpi-ch/patches/patch-src_mpi_romio_configure
new file mode 100644
index 00000000000..674e2788d1b
--- /dev/null
+++ b/parallel/mpi-ch/patches/patch-src_mpi_romio_configure
@@ -0,0 +1,15 @@
+$NetBSD: patch-src_mpi_romio_configure,v 1.1 2017/04/29 18:18:52 adam Exp $
+
+Portability fix.
+
+--- src/mpi/romio/configure.orig 2017-04-28 20:33:04.000000000 +0000
++++ src/mpi/romio/configure
+@@ -22929,7 +22929,7 @@ if test "${with_aio_lite+set}" = set; th
+ withval=$with_aio_lite; with_aiolite=yes
+ fi
+
+-if test "x$with_aiolite" == xyes; then :
++if test "x$with_aiolite" = xyes; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for lio_listio in -laio-lite" >&5
+ $as_echo_n "checking for lio_listio in -laio-lite... " >&6; }
+ if ${ac_cv_lib_aio_lite_lio_listio+:} false; then :
diff --git a/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h b/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h
index e5eee81d1b2..a6601aeb6ab 100644
--- a/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h
+++ b/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h
@@ -1,10 +1,10 @@
-$NetBSD: patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h,v 1.1 2013/04/15 21:40:17 adam Exp $
+$NetBSD: patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h,v 1.2 2017/04/29 18:18:52 adam Exp $
Use pthread_mutexattr_setpshared() only when available.
---- src/mpid/ch3/channels/nemesis/include/mpidi_ch3_impl.h.orig 2013-04-15 21:03:05.000000000 +0000
+--- src/mpid/ch3/channels/nemesis/include/mpidi_ch3_impl.h.orig 2015-11-10 02:39:01.000000000 +0000
+++ src/mpid/ch3/channels/nemesis/include/mpidi_ch3_impl.h
-@@ -99,6 +99,7 @@ int MPIDI_CH3_SHM_Win_free(MPID_Win **wi
+@@ -106,6 +106,7 @@ int MPIDI_CH3_SHM_Win_free(MPID_Win **wi
"**pthread_unlock %s", strerror(pt_err)); \
} while (0)
@@ -12,8 +12,8 @@ Use pthread_mutexattr_setpshared() only when available.
#define MPIDI_CH3I_SHM_MUTEX_INIT(win_ptr) \
do { \
int pt_err; \
-@@ -117,6 +118,23 @@ int MPIDI_CH3_SHM_Win_free(MPID_Win **wi
- MPIU_ERR_CHKANDJUMP1(pt_err, mpi_errno, MPI_ERR_OTHER, "**pthread_mutex", \
+@@ -124,6 +125,23 @@ int MPIDI_CH3_SHM_Win_free(MPID_Win **wi
+ MPIR_ERR_CHKANDJUMP1(pt_err, mpi_errno, MPI_ERR_OTHER, "**pthread_mutex", \
"**pthread_mutex %s", strerror(pt_err)); \
} while (0);
+#else
@@ -23,13 +23,13 @@ Use pthread_mutexattr_setpshared() only when available.
+ pthread_mutexattr_t attr; \
+ \
+ pt_err = pthread_mutexattr_init(&attr); \
-+ MPIU_ERR_CHKANDJUMP1(pt_err, mpi_errno, MPI_ERR_OTHER, "**pthread_mutex", \
++ MPIR_ERR_CHKANDJUMP1(pt_err, mpi_errno, MPI_ERR_OTHER, "**pthread_mutex", \
+ "**pthread_mutex %s", strerror(pt_err)); \
+ pt_err = pthread_mutex_init((win_ptr)->shm_mutex, &attr); \
-+ MPIU_ERR_CHKANDJUMP1(pt_err, mpi_errno, MPI_ERR_OTHER, "**pthread_mutex", \
++ MPIR_ERR_CHKANDJUMP1(pt_err, mpi_errno, MPI_ERR_OTHER, "**pthread_mutex", \
+ "**pthread_mutex %s", strerror(pt_err)); \
+ pt_err = pthread_mutexattr_destroy(&attr); \
-+ MPIU_ERR_CHKANDJUMP1(pt_err, mpi_errno, MPI_ERR_OTHER, "**pthread_mutex", \
++ MPIR_ERR_CHKANDJUMP1(pt_err, mpi_errno, MPI_ERR_OTHER, "**pthread_mutex", \
+ "**pthread_mutex %s", strerror(pt_err)); \
+ } while (0);
+#endif
diff --git a/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c b/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c
new file mode 100644
index 00000000000..d06a96007c3
--- /dev/null
+++ b/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c
@@ -0,0 +1,24 @@
+$NetBSD: patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c,v 1.1 2017/04/29 18:18:52 adam Exp $
+
+Use pthread_mutexattr_setpshared() only when available.
+
+--- src/mpid/ch3/channels/nemesis/src/ch3_init.c.orig 2017-04-29 16:30:18.534262462 +0000
++++ src/mpid/ch3/channels/nemesis/src/ch3_init.c
+@@ -52,6 +52,7 @@ static int split_type(MPID_Comm * comm_p
+
+ int MPIDI_CH3I_Shm_supported(void)
+ {
++#ifdef _POSIX_THREAD_PROCESS_SHARED
+ int mutex_err;
+ pthread_mutexattr_t attr;
+
+@@ -63,6 +64,9 @@ int MPIDI_CH3I_Shm_supported(void)
+ pthread_mutexattr_destroy(&attr);
+
+ return !mutex_err;
++#else
++ return 0;
++#endif
+ }
+
+ static MPID_CommOps comm_fns = {
diff --git a/parallel/mpi-ch/patches/patch-src_pm_hydra_configure b/parallel/mpi-ch/patches/patch-src_pm_hydra_configure
index ba834d965e6..bf822fc77d2 100644
--- a/parallel/mpi-ch/patches/patch-src_pm_hydra_configure
+++ b/parallel/mpi-ch/patches/patch-src_pm_hydra_configure
@@ -1,4 +1,6 @@
-$NetBSD: patch-src_pm_hydra_configure,v 1.2 2013/03/17 17:08:52 asau Exp $
+$NetBSD: patch-src_pm_hydra_configure,v 1.3 2017/04/29 18:18:52 adam Exp $
+
+Last newline is not needed.
--- src/pm/hydra/configure.orig 2012-12-20 21:28:12.000000000 +0100
+++ src/pm/hydra/configure 2013-01-24 15:36:08.260189221 +0100