diff options
author | thor <thor@pkgsrc.org> | 2022-08-25 22:09:14 +0000 |
---|---|---|
committer | thor <thor@pkgsrc.org> | 2022-08-25 22:09:14 +0000 |
commit | 5883b7bdec49ad0c257e4efe55e2e97732d36290 (patch) | |
tree | be79b9f80c1323b502d1211a724c3f905c8ac4c5 /parallel | |
parent | f2a618f58b94d8cd34d7b8b992b79ccf94d2ceb5 (diff) | |
download | pkgsrc-5883b7bdec49ad0c257e4efe55e2e97732d36290.tar.gz |
parallel/openmpi: update to 4.1.4
This is a long overdue update with some refinements, notably
default-on f90 option.
We skipped some major releases, so please excuse me not including
the whole changelog. See https://open-mpi.org for more information.
Diffstat (limited to 'parallel')
-rw-r--r-- | parallel/openmpi/DESCR | 10 | ||||
-rw-r--r-- | parallel/openmpi/Makefile | 80 | ||||
-rw-r--r-- | parallel/openmpi/PLIST | 441 | ||||
-rw-r--r-- | parallel/openmpi/buildlink3.mk | 6 | ||||
-rw-r--r-- | parallel/openmpi/distinfo | 19 | ||||
-rw-r--r-- | parallel/openmpi/options.mk | 17 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-aa | 23 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-ai | 53 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-aj | 60 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-ak | 4 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-configure | 228 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-ompi_mca_io_romio321_romio_configure | 15 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-ompi_mca_sharedfp_sm_sharedfp__sm.c | 14 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-opal_asm_asm-data.txt | 14 | ||||
-rw-r--r-- | parallel/openmpi/patches/patch-opal_tools_wrappers_opal__wrapper.c | 32 |
15 files changed, 318 insertions, 698 deletions
diff --git a/parallel/openmpi/DESCR b/parallel/openmpi/DESCR index da7b5e1ef60..76f037fffd3 100644 --- a/parallel/openmpi/DESCR +++ b/parallel/openmpi/DESCR @@ -1,11 +1,6 @@ The Open MPI Project is an open source Message Passing Interface implementation that is developed and maintained by a consortium of -academic, research, and industry partners. Open MPI is therefore able -to combine the expertise, technologies, and resources from all across -the High Performance Computing community in order to build the best -MPI library available. Open MPI offers advantages for system and -software vendors, application developers and computer science -researchers. +academic, research, and industry partners. Features implemented or in short-term development for Open MPI include: - Full MPI-3.1 standards conformance @@ -24,6 +19,3 @@ Features implemented or in short-term development for Open MPI include: - Component-based design, documented APIs - Active, responsive mailing list - Open source license based on the BSD license - -[Note that the pkgsrc version is very old, but still appears to -support MPI 3.0.] diff --git a/parallel/openmpi/Makefile b/parallel/openmpi/Makefile index e412da2b54a..76fd915d0c8 100644 --- a/parallel/openmpi/Makefile +++ b/parallel/openmpi/Makefile @@ -1,12 +1,11 @@ -# $NetBSD: Makefile,v 1.50 2022/07/27 14:28:32 wiz Exp $ +# $NetBSD: Makefile,v 1.51 2022/08/25 22:09:14 thor Exp $ -DISTNAME= openmpi-1.10.7 -PKGREVISION= 10 +DISTNAME= openmpi-4.1.4 CATEGORIES= parallel -MASTER_SITES= https://www.open-mpi.org/software/ompi/v1.10/downloads/ +MASTER_SITES= https://download.open-mpi.org/release/open-mpi/v4.1/ EXTRACT_SUFX= .tar.bz2 -MAINTAINER= asau@inbox.ru +MAINTAINER= thor@NetBSD.org HOMEPAGE= https://www.open-mpi.org/ COMMENT= Open source MPI-3.1 implementation LICENSE= modified-bsd @@ -15,53 +14,72 @@ CONFLICTS= mpich-[0-9]* USE_LANGUAGES= c c++ USE_LIBTOOL= yes -USE_TOOLS+= perl:run +USE_TOOLS+= perl:run bash:run GNU_CONFIGURE= yes -CONFIGURE_ARGS+= --without-slurm +CONFIG_SHELL= bash CONFIGURE_ARGS+= --enable-contrib-no-build=vt # in separate package CONFIGURE_ARGS+= --with-libltdl=${BUILDLINK_PREFIX.libltdl} -CONFIGURE_ARGS+= --with-hwloc=${BUILDLINK_PREFIX.hwloc} -CONFIGURE_ARGS+= --with-wrapper-ldflags="-L${PREFIX}/lib ${LINKER_RPATH_FLAG}${PREFIX}/lib" +# See below about external hwloc. +#CONFIGURE_ARGS+= --with-hwloc=${BUILDLINK_PREFIX.hwloc} +# OSHM Needs additional dependencies and also is surpassed with proper MPI +# functionality. Rare use cases. +CONFIGURE_ARGS+= --disable-oshmem CONFIGURE_ARGS+= OPAL_HAVE_LTDL_ADVISE=0 -LIBTOOL_OVERRIDE= ${WRKSRC}/libtool \ - ${WRKSRC}/ompi/contrib/vt/vt/extlib/otf/libtool \ - ${WRKSRC}/ompi/contrib/vt/vt/libtool \ - ${WRKSRC}/ompi/mca/io/romio/romio/libtool -SHLIBTOOL_OVERRIDE= ${WRKSRC}/config/libtool.m4 - -# Prevent detection of OpenMP support in order to make PLIST consistent -BUILDLINK_TRANSFORM= rm:-fopenmp +LIBTOOL_OVERRIDE= libtool \ + ompi/contrib/vt/vt/extlib/otf/libtool \ + ompi/contrib/vt/vt/libtool \ + ompi/mca/io/romio/romio/libtool +SHLIBTOOL_OVERRIDE= config/libtool.m4 .include "options.mk" TEST_TARGET= check -PLIST_VARS+= linux loadleveler oshmem pstattest shm -PLIST_VARS+= ignoretkr noignoretkr +# Unsurprisingly, files that are only produced on GNU/Linux systems. +PLIST_VARS+= linux +# \todo Explain. Apparently built if !Linux. +PLIST_VARS+= pstattest +# \todo Explain. +PLIST_VARS+= ignoretkr +PLIST_VARS+= noignoretkr + .if ${OPSYS} == "Linux" -PLIST.shm= yes PLIST.linux= yes -PLIST.loadleveler= yes -PLIST.oshmem= yes -PLIST.ignoretkr= yes -.elif ${OPSYS} == "AIX" -PLIST.loadleveler= yes -.elif ${OPSYS} == "DragonFly" || ${OPSYS} == "FreeBSD" || \ - (${OPSYS} == "NetBSD" && exists(/var/shm)) -PLIST.shm= yes .endif + .if ${OPSYS} != "Linux" PLIST.pstattest= yes +.endif + +.if ${OPSYS} == "Linux" || ${OPSYS} == "NetBSD" +PLIST.ignoretkr= yes +.else +# \todo Explain why on Darwin we don't set one of them. . if ${OPSYS} != "Darwin" PLIST.noignoretkr= yes . endif .endif REPLACE_PERL= ompi/tools/wrappers/mpijavac.pl.in +REPLACE_PERL+= ompi/mca/common/monitoring/*.pl + +EGDIR= ${PREFIX}/share/examples/openmpi +CONF_SAMPLES+= openmpi-default-hostfile openmpi-mca-params.conf +CONF_SAMPLES+= pmix-mca-params.conf +.for i in ${CONF_SAMPLES} +CONF_FILES+= ${EGDIR}/${i} ${PKG_SYSCONFDIR}/${i} +.endfor + +INSTALLATION_DIRS+= ${EGDIR} + +post-install: +.for i in ${CONF_SAMPLES} + ${MV} ${DESTDIR}${PKG_SYSCONFDIR}/${i} ${DESTDIR}${EGDIR}/${i} +.endfor -#LIBLTDL_CONVENIENCE_SUBDIR= opal/libltdl -#.include "../../devel/libltdl/convenience.mk" # for "test" target to work .include "../../devel/libltdl/buildlink3.mk" -.include "../../parallel/hwloc/buildlink3.mk" +# Too old, use internal hwloc 2 instead. As hwloc 2 API/ABI is incompatible, +# upgrade has to be considered carefully. +#.include "../../parallel/hwloc/buildlink3.mk" .include "../../mk/bsd.pkg.mk" diff --git a/parallel/openmpi/PLIST b/parallel/openmpi/PLIST index 374482a9e8b..dbd29ffd6bb 100644 --- a/parallel/openmpi/PLIST +++ b/parallel/openmpi/PLIST @@ -1,4 +1,5 @@ -@comment $NetBSD: PLIST,v 1.19 2018/01/04 20:31:28 adam Exp $ +@comment $NetBSD: PLIST,v 1.20 2022/08/25 22:09:14 thor Exp $ +bin/aggregate_profile.pl bin/mpiCC bin/mpic++ bin/mpicc @@ -11,31 +12,20 @@ ${PLIST.java}bin/mpijavac ${PLIST.java}bin/mpijavac.pl bin/mpirun bin/ompi-clean -bin/ompi-ps bin/ompi-server -bin/ompi-top bin/ompi_info bin/opal_wrapper bin/orte-clean -bin/orte-dvm bin/orte-info -bin/orte-ps bin/orte-server -bin/orte-submit -bin/orte-top bin/ortecc bin/orted bin/orterun -${PLIST.oshmem}bin/oshcc -${PLIST.oshmem}bin/oshfort -${PLIST.oshmem}bin/oshmem_info -${PLIST.oshmem}bin/oshrun -${PLIST.oshmem}bin/shmemcc -${PLIST.oshmem}bin/shmemfort -${PLIST.oshmem}bin/shmemrun +bin/profile2mat.pl include/mpi-ext.h include/mpi.h include/mpi_portable_platform.h +include/mpif-c-constants-decl.h ${PLIST.f90}include/mpif-config.h ${PLIST.f90}include/mpif-constants.h include/mpif-ext.h @@ -46,63 +36,25 @@ ${PLIST.f90}include/mpif-io-handles.h ${PLIST.f90}include/mpif-sentinels.h include/mpif-sizeof.h include/mpif.h -${PLIST.oshmem}include/mpp/shmem.fh -${PLIST.oshmem}include/mpp/shmem.h -include/openmpi/ompi/mpi/cxx/comm.h -include/openmpi/ompi/mpi/cxx/comm_inln.h -include/openmpi/ompi/mpi/cxx/constants.h -include/openmpi/ompi/mpi/cxx/datatype.h -include/openmpi/ompi/mpi/cxx/datatype_inln.h -include/openmpi/ompi/mpi/cxx/errhandler.h -include/openmpi/ompi/mpi/cxx/errhandler_inln.h -include/openmpi/ompi/mpi/cxx/exception.h -include/openmpi/ompi/mpi/cxx/file.h -include/openmpi/ompi/mpi/cxx/file_inln.h -include/openmpi/ompi/mpi/cxx/functions.h -include/openmpi/ompi/mpi/cxx/functions_inln.h -include/openmpi/ompi/mpi/cxx/group.h -include/openmpi/ompi/mpi/cxx/group_inln.h -include/openmpi/ompi/mpi/cxx/info.h -include/openmpi/ompi/mpi/cxx/info_inln.h -include/openmpi/ompi/mpi/cxx/intercomm.h -include/openmpi/ompi/mpi/cxx/intercomm_inln.h -include/openmpi/ompi/mpi/cxx/intracomm.h -include/openmpi/ompi/mpi/cxx/intracomm_inln.h -include/openmpi/ompi/mpi/cxx/mpicxx.h -include/openmpi/ompi/mpi/cxx/op.h -include/openmpi/ompi/mpi/cxx/op_inln.h -include/openmpi/ompi/mpi/cxx/request.h -include/openmpi/ompi/mpi/cxx/request_inln.h -include/openmpi/ompi/mpi/cxx/status.h -include/openmpi/ompi/mpi/cxx/status_inln.h -include/openmpi/ompi/mpi/cxx/topology.h -include/openmpi/ompi/mpi/cxx/topology_inln.h -include/openmpi/ompi/mpi/cxx/win.h -include/openmpi/ompi/mpi/cxx/win_inln.h +include/openmpi/mpiext/mpiext_affinity_c.h +include/openmpi/mpiext/mpiext_cuda_c.h +include/openmpi/mpiext/mpiext_pcollreq_c.h +${PLIST.f90}include/openmpi/mpiext/mpiext_pcollreq_mpifh.h +include/openmpi/mpiext/pmpiext_pcollreq_c.h ${PLIST.java}include/openmpi/ompi/mpi/java/mpiJava.h -${PLIST.oshmem}include/openshmem/oshmem/constants.h -${PLIST.oshmem}include/openshmem/oshmem/frameworks.h -${PLIST.oshmem}include/openshmem/oshmem/types.h -${PLIST.oshmem}include/openshmem/oshmem/version.h -${PLIST.oshmem}include/openshmem/oshmem_config.h -${PLIST.oshmem}include/pshmem.h -${PLIST.oshmem}include/pshmemx.h -${PLIST.oshmem}include/shmem-compat.h -${PLIST.oshmem}include/shmem.fh -${PLIST.oshmem}include/shmem.h -${PLIST.oshmem}include/shmemx.h +lib/libmca_common_dstore.la +lib/libmca_common_monitoring.la +lib/libmca_common_ompio.la lib/libmca_common_sm.la lib/libmpi.la -lib/libmpi_cxx.la ${PLIST.java}lib/libmpi_java.la ${PLIST.f90}lib/libmpi_mpifh.la ${PLIST.f90}${PLIST.noignoretkr}lib/libmpi_usempi.la -${PLIST.ignoretkr}lib/libmpi_usempi_ignore_tkr.la +${PLIST.f90}${PLIST.ignoretkr}lib/libmpi_usempi_ignore_tkr.la ${PLIST.f08}lib/libmpi_usempif08.la lib/libompitrace.la lib/libopen-pal.la lib/libopen-rte.la -${PLIST.oshmem}lib/liboshmem.la ${PLIST.java}lib/mpi.jar ${PLIST.f90}lib/mpi.mod ${PLIST.f90}${PLIST.ignoretkr}lib/mpi_ext.mod @@ -112,22 +64,21 @@ ${PLIST.f08}lib/mpi_f08_ext.mod ${PLIST.f08}lib/mpi_f08_interfaces.mod ${PLIST.f08}lib/mpi_f08_interfaces_callbacks.mod ${PLIST.f08}lib/mpi_f08_types.mod +lib/ompi_monitoring_prof.la lib/openmpi/libompi_dbg_msgq.la lib/openmpi/mca_allocator_basic.la lib/openmpi/mca_allocator_bucket.la -${PLIST.oshmem}lib/openmpi/mca_atomic_basic.la -lib/openmpi/mca_bcol_basesmuma.la -lib/openmpi/mca_bcol_ptpcoll.la lib/openmpi/mca_bml_r2.la lib/openmpi/mca_btl_self.la lib/openmpi/mca_btl_sm.la lib/openmpi/mca_btl_tcp.la lib/openmpi/mca_btl_vader.la +lib/openmpi/mca_coll_adapt.la lib/openmpi/mca_coll_basic.la -lib/openmpi/mca_coll_hierarch.la +lib/openmpi/mca_coll_han.la lib/openmpi/mca_coll_inter.la lib/openmpi/mca_coll_libnbc.la -lib/openmpi/mca_coll_ml.la +lib/openmpi/mca_coll_monitoring.la lib/openmpi/mca_coll_self.la lib/openmpi/mca_coll_sm.la lib/openmpi/mca_coll_sync.la @@ -135,92 +86,85 @@ lib/openmpi/mca_coll_tuned.la lib/openmpi/mca_compress_bzip.la lib/openmpi/mca_compress_gzip.la lib/openmpi/mca_crs_none.la -lib/openmpi/mca_db_hash.la -lib/openmpi/mca_db_print.la -lib/openmpi/mca_dfs_app.la -lib/openmpi/mca_dfs_orted.la -lib/openmpi/mca_dfs_test.la -lib/openmpi/mca_dpm_orte.la lib/openmpi/mca_errmgr_default_app.la lib/openmpi/mca_errmgr_default_hnp.la lib/openmpi/mca_errmgr_default_orted.la lib/openmpi/mca_errmgr_default_tool.la lib/openmpi/mca_ess_env.la lib/openmpi/mca_ess_hnp.la +lib/openmpi/mca_ess_pmi.la lib/openmpi/mca_ess_singleton.la lib/openmpi/mca_ess_tool.la lib/openmpi/mca_fbtl_posix.la lib/openmpi/mca_fcoll_dynamic.la +lib/openmpi/mca_fcoll_dynamic_gen2.la lib/openmpi/mca_fcoll_individual.la -lib/openmpi/mca_fcoll_static.la lib/openmpi/mca_fcoll_two_phase.la -lib/openmpi/mca_fcoll_ylib.la +lib/openmpi/mca_fcoll_vulcan.la lib/openmpi/mca_filem_raw.la lib/openmpi/mca_fs_ufs.la -lib/openmpi/mca_grpcomm_bad.la +lib/openmpi/mca_grpcomm_direct.la lib/openmpi/mca_io_ompio.la -lib/openmpi/mca_io_romio.la +lib/openmpi/mca_io_romio321.la lib/openmpi/mca_iof_hnp.la -lib/openmpi/mca_iof_mr_hnp.la -lib/openmpi/mca_iof_mr_orted.la lib/openmpi/mca_iof_orted.la lib/openmpi/mca_iof_tool.la -${PLIST.oshmem}lib/openmpi/mca_memheap_buddy.la -${PLIST.oshmem}lib/openmpi/mca_memheap_ptmalloc.la -lib/openmpi/mca_mpool_grdma.la -lib/openmpi/mca_mpool_sm.la +lib/openmpi/mca_mpool_hugepage.la lib/openmpi/mca_odls_default.la +lib/openmpi/mca_odls_pspawn.la lib/openmpi/mca_oob_tcp.la +lib/openmpi/mca_op_avx.la +lib/openmpi/mca_osc_monitoring.la lib/openmpi/mca_osc_pt2pt.la +lib/openmpi/mca_osc_rdma.la lib/openmpi/mca_osc_sm.la +lib/openmpi/mca_patcher_overwrite.la lib/openmpi/mca_plm_isolated.la lib/openmpi/mca_plm_rsh.la -lib/openmpi/mca_pml_bfo.la +lib/openmpi/mca_pmix_flux.la +lib/openmpi/mca_pmix_isolated.la +lib/openmpi/mca_pmix_pmix3x.la lib/openmpi/mca_pml_cm.la +lib/openmpi/mca_pml_monitoring.la lib/openmpi/mca_pml_ob1.la ${PLIST.linux}lib/openmpi/mca_pstat_linux.la ${PLIST.pstattest}lib/openmpi/mca_pstat_test.la -lib/openmpi/mca_pubsub_orte.la ${PLIST.sge}lib/openmpi/mca_ras_gridengine.la -${PLIST.loadleveler}lib/openmpi/mca_ras_loadleveler.la lib/openmpi/mca_ras_simulator.la -lib/openmpi/mca_rcache_vma.la +lib/openmpi/mca_rcache_grdma.la +${PLIST.linux}lib/openmpi/mca_reachable_netlink.la +lib/openmpi/mca_reachable_weighted.la +lib/openmpi/mca_regx_fwd.la +lib/openmpi/mca_regx_naive.la +lib/openmpi/mca_regx_reverse.la lib/openmpi/mca_rmaps_mindist.la lib/openmpi/mca_rmaps_ppr.la lib/openmpi/mca_rmaps_rank_file.la lib/openmpi/mca_rmaps_resilient.la lib/openmpi/mca_rmaps_round_robin.la lib/openmpi/mca_rmaps_seq.la -lib/openmpi/mca_rmaps_staged.la lib/openmpi/mca_rml_oob.la lib/openmpi/mca_routed_binomial.la -lib/openmpi/mca_routed_debruijn.la lib/openmpi/mca_routed_direct.la lib/openmpi/mca_routed_radix.la -lib/openmpi/mca_sbgp_basesmsocket.la -lib/openmpi/mca_sbgp_basesmuma.la -lib/openmpi/mca_sbgp_p2p.la -${PLIST.oshmem}lib/openmpi/mca_scoll_basic.la -${PLIST.oshmem}lib/openmpi/mca_scoll_mpi.la -lib/openmpi/mca_sec_basic.la +lib/openmpi/mca_rtc_hwloc.la +lib/openmpi/mca_schizo_flux.la +lib/openmpi/mca_schizo_jsm.la +lib/openmpi/mca_schizo_ompi.la +lib/openmpi/mca_schizo_orte.la lib/openmpi/mca_sharedfp_individual.la lib/openmpi/mca_sharedfp_lockedfile.la lib/openmpi/mca_sharedfp_sm.la lib/openmpi/mca_shmem_mmap.la lib/openmpi/mca_shmem_posix.la lib/openmpi/mca_shmem_sysv.la -${PLIST.oshmem}lib/openmpi/mca_spml_yoda.la -${PLIST.oshmem}lib/openmpi/mca_sshmem_mmap.la -${PLIST.oshmem}lib/openmpi/mca_sshmem_sysv.la lib/openmpi/mca_state_app.la -lib/openmpi/mca_state_dvm.la lib/openmpi/mca_state_hnp.la lib/openmpi/mca_state_novm.la lib/openmpi/mca_state_orted.la -lib/openmpi/mca_state_staged_hnp.la -lib/openmpi/mca_state_staged_orted.la lib/openmpi/mca_state_tool.la lib/openmpi/mca_topo_basic.la +lib/openmpi/mca_topo_treematch.la lib/openmpi/mca_vprotocol_pessimist.la lib/pkgconfig/ompi-c.pc lib/pkgconfig/ompi-cxx.pc @@ -229,6 +173,29 @@ lib/pkgconfig/ompi-f90.pc lib/pkgconfig/ompi-fort.pc lib/pkgconfig/ompi.pc lib/pkgconfig/orte.pc +lib/pkgconfig/pmix.pc +lib/pmix/mca_bfrops_v12.la +lib/pmix/mca_bfrops_v20.la +lib/pmix/mca_bfrops_v21.la +lib/pmix/mca_bfrops_v3.la +lib/pmix/mca_gds_ds12.la +${PLIST.linux}lib/pmix/mca_gds_ds21.la +lib/pmix/mca_gds_hash.la +lib/pmix/mca_pcompress_zlib.la +lib/pmix/mca_plog_default.la +lib/pmix/mca_plog_stdfd.la +lib/pmix/mca_plog_syslog.la +lib/pmix/mca_preg_compress.la +lib/pmix/mca_preg_native.la +lib/pmix/mca_psec_native.la +lib/pmix/mca_psec_none.la +lib/pmix/mca_psensor_file.la +lib/pmix/mca_psensor_heartbeat.la +lib/pmix/mca_pshmem_mmap.la +lib/pmix/mca_psquash_flex128.la +lib/pmix/mca_psquash_native.la +lib/pmix/mca_ptl_tcp.la +lib/pmix/mca_ptl_usock.la ${PLIST.f08}lib/pmpi_f08_interfaces.mod man/man1/mpiCC.1 man/man1/mpic++.1 @@ -241,28 +208,38 @@ man/man1/mpifort.1 ${PLIST.java}man/man1/mpijavac.1 man/man1/mpirun.1 man/man1/ompi-clean.1 -man/man1/ompi-ps.1 man/man1/ompi-server.1 -man/man1/ompi-top.1 man/man1/ompi_info.1 man/man1/opal_wrapper.1 man/man1/orte-clean.1 -man/man1/orte-dvm.1 man/man1/orte-info.1 -man/man1/orte-ps.1 man/man1/orte-server.1 -man/man1/orte-submit.1 -man/man1/orte-top.1 man/man1/orted.1 man/man1/orterun.1 -${PLIST.oshmem}man/man1/oshcc.1 -${PLIST.oshmem}man/man1/oshfort.1 -${PLIST.oshmem}man/man1/oshmem_info.1 -${PLIST.oshmem}man/man1/oshrun.1 -${PLIST.oshmem}man/man1/shmemcc.1 -${PLIST.oshmem}man/man1/shmemfort.1 -${PLIST.oshmem}man/man1/shmemrun.1 man/man3/MPI.3 +man/man3/MPIX_Allgather_init.3 +man/man3/MPIX_Allgatherv_init.3 +man/man3/MPIX_Allreduce_init.3 +man/man3/MPIX_Alltoall_init.3 +man/man3/MPIX_Alltoallv_init.3 +man/man3/MPIX_Alltoallw_init.3 +man/man3/MPIX_Barrier_init.3 +man/man3/MPIX_Bcast_init.3 +man/man3/MPIX_Exscan_init.3 +man/man3/MPIX_Gather_init.3 +man/man3/MPIX_Gatherv_init.3 +man/man3/MPIX_Neighbor_allgather_init.3 +man/man3/MPIX_Neighbor_allgatherv_init.3 +man/man3/MPIX_Neighbor_alltoall_init.3 +man/man3/MPIX_Neighbor_alltoallv_init.3 +man/man3/MPIX_Neighbor_alltoallw_init.3 +man/man3/MPIX_Query_cuda_support.3 +man/man3/MPIX_Reduce_init.3 +man/man3/MPIX_Reduce_scatter_block_init.3 +man/man3/MPIX_Reduce_scatter_init.3 +man/man3/MPIX_Scan_init.3 +man/man3/MPIX_Scatter_init.3 +man/man3/MPIX_Scatterv_init.3 man/man3/MPI_Abort.3 man/man3/MPI_Accumulate.3 man/man3/MPI_Add_error_class.3 @@ -366,10 +343,14 @@ man/man3/MPI_File_get_size.3 man/man3/MPI_File_get_type_extent.3 man/man3/MPI_File_get_view.3 man/man3/MPI_File_iread.3 +man/man3/MPI_File_iread_all.3 man/man3/MPI_File_iread_at.3 +man/man3/MPI_File_iread_at_all.3 man/man3/MPI_File_iread_shared.3 man/man3/MPI_File_iwrite.3 +man/man3/MPI_File_iwrite_all.3 man/man3/MPI_File_iwrite_at.3 +man/man3/MPI_File_iwrite_at_all.3 man/man3/MPI_File_iwrite_shared.3 man/man3/MPI_File_open.3 man/man3/MPI_File_preallocate.3 @@ -492,6 +473,8 @@ man/man3/MPI_Issend.3 man/man3/MPI_Keyval_create.3 man/man3/MPI_Keyval_free.3 man/man3/MPI_Lookup_name.3 +man/man3/MPI_Message_c2f.3 +man/man3/MPI_Message_f2c.3 man/man3/MPI_Mprobe.3 man/man3/MPI_Mrecv.3 man/man3/MPI_Neighbor_allgather.3 @@ -500,6 +483,7 @@ man/man3/MPI_Neighbor_alltoall.3 man/man3/MPI_Neighbor_alltoallv.3 man/man3/MPI_Neighbor_alltoallw.3 man/man3/MPI_Op_c2f.3 +man/man3/MPI_Op_commutative.3 man/man3/MPI_Op_create.3 man/man3/MPI_Op_f2c.3 man/man3/MPI_Op_free.3 @@ -670,228 +654,42 @@ man/man3/MPI_Win_unlock_all.3 man/man3/MPI_Win_wait.3 man/man3/MPI_Wtick.3 man/man3/MPI_Wtime.3 +man/man3/OMPI_Affinity_str.3 man/man3/OpenMPI.3 -${PLIST.oshmem}man/man3/OpenSHMEM.3 -${PLIST.oshmem}man/man3/_my_pe.3 -${PLIST.oshmem}man/man3/_num_pes.3 -${PLIST.oshmem}man/man3/intro_shmem.3 -${PLIST.oshmem}man/man3/shfree.3 -${PLIST.oshmem}man/man3/shmalloc.3 -${PLIST.oshmem}man/man3/shmem_addr_accessible.3 -${PLIST.oshmem}man/man3/shmem_align.3 -${PLIST.oshmem}man/man3/shmem_barrier.3 -${PLIST.oshmem}man/man3/shmem_barrier_all.3 -${PLIST.oshmem}man/man3/shmem_broadcast32.3 -${PLIST.oshmem}man/man3/shmem_broadcast64.3 -${PLIST.oshmem}man/man3/shmem_char_g.3 -${PLIST.oshmem}man/man3/shmem_char_get.3 -${PLIST.oshmem}man/man3/shmem_char_p.3 -${PLIST.oshmem}man/man3/shmem_char_put.3 -${PLIST.oshmem}man/man3/shmem_clear_cache_inv.3 -${PLIST.oshmem}man/man3/shmem_clear_cache_line_inv.3 -${PLIST.oshmem}man/man3/shmem_clear_lock.3 -${PLIST.oshmem}man/man3/shmem_collect32.3 -${PLIST.oshmem}man/man3/shmem_collect64.3 -${PLIST.oshmem}man/man3/shmem_complexd_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_complexd_sum_to_all.3 -${PLIST.oshmem}man/man3/shmem_complexf_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_complexf_sum_to_all.3 -${PLIST.oshmem}man/man3/shmem_double_g.3 -${PLIST.oshmem}man/man3/shmem_double_get.3 -${PLIST.oshmem}man/man3/shmem_double_iget.3 -${PLIST.oshmem}man/man3/shmem_double_iput.3 -${PLIST.oshmem}man/man3/shmem_double_max_to_all.3 -${PLIST.oshmem}man/man3/shmem_double_min_to_all.3 -${PLIST.oshmem}man/man3/shmem_double_p.3 -${PLIST.oshmem}man/man3/shmem_double_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_double_put.3 -${PLIST.oshmem}man/man3/shmem_double_sum_to_all.3 -${PLIST.oshmem}man/man3/shmem_double_swap.3 -${PLIST.oshmem}man/man3/shmem_fcollect32.3 -${PLIST.oshmem}man/man3/shmem_fcollect64.3 -${PLIST.oshmem}man/man3/shmem_fence.3 -${PLIST.oshmem}man/man3/shmem_finalize.3 -${PLIST.oshmem}man/man3/shmem_float_g.3 -${PLIST.oshmem}man/man3/shmem_float_get.3 -${PLIST.oshmem}man/man3/shmem_float_iget.3 -${PLIST.oshmem}man/man3/shmem_float_iput.3 -${PLIST.oshmem}man/man3/shmem_float_max_to_all.3 -${PLIST.oshmem}man/man3/shmem_float_min_to_all.3 -${PLIST.oshmem}man/man3/shmem_float_p.3 -${PLIST.oshmem}man/man3/shmem_float_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_float_put.3 -${PLIST.oshmem}man/man3/shmem_float_sum_to_all.3 -${PLIST.oshmem}man/man3/shmem_float_swap.3 -${PLIST.oshmem}man/man3/shmem_free.3 -${PLIST.oshmem}man/man3/shmem_get128.3 -${PLIST.oshmem}man/man3/shmem_get32.3 -${PLIST.oshmem}man/man3/shmem_get64.3 -${PLIST.oshmem}man/man3/shmem_getmem.3 -${PLIST.oshmem}man/man3/shmem_global_exit.3 -${PLIST.oshmem}man/man3/shmem_iget128.3 -${PLIST.oshmem}man/man3/shmem_iget32.3 -${PLIST.oshmem}man/man3/shmem_iget64.3 -${PLIST.oshmem}man/man3/shmem_info_get_name.3 -${PLIST.oshmem}man/man3/shmem_info_get_version.3 -${PLIST.oshmem}man/man3/shmem_init.3 -${PLIST.oshmem}man/man3/shmem_int_add.3 -${PLIST.oshmem}man/man3/shmem_int_and_to_all.3 -${PLIST.oshmem}man/man3/shmem_int_cswap.3 -${PLIST.oshmem}man/man3/shmem_int_fadd.3 -${PLIST.oshmem}man/man3/shmem_int_finc.3 -${PLIST.oshmem}man/man3/shmem_int_g.3 -${PLIST.oshmem}man/man3/shmem_int_get.3 -${PLIST.oshmem}man/man3/shmem_int_iget.3 -${PLIST.oshmem}man/man3/shmem_int_inc.3 -${PLIST.oshmem}man/man3/shmem_int_iput.3 -${PLIST.oshmem}man/man3/shmem_int_max_to_all.3 -${PLIST.oshmem}man/man3/shmem_int_min_to_all.3 -${PLIST.oshmem}man/man3/shmem_int_or_to_all.3 -${PLIST.oshmem}man/man3/shmem_int_p.3 -${PLIST.oshmem}man/man3/shmem_int_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_int_put.3 -${PLIST.oshmem}man/man3/shmem_int_sum_to_all.3 -${PLIST.oshmem}man/man3/shmem_int_swap.3 -${PLIST.oshmem}man/man3/shmem_int_wait.3 -${PLIST.oshmem}man/man3/shmem_int_wait_until.3 -${PLIST.oshmem}man/man3/shmem_int_xor_to_all.3 -${PLIST.oshmem}man/man3/shmem_iput128.3 -${PLIST.oshmem}man/man3/shmem_iput32.3 -${PLIST.oshmem}man/man3/shmem_iput64.3 -${PLIST.oshmem}man/man3/shmem_long_add.3 -${PLIST.oshmem}man/man3/shmem_long_and_to_all.3 -${PLIST.oshmem}man/man3/shmem_long_cswap.3 -${PLIST.oshmem}man/man3/shmem_long_fadd.3 -${PLIST.oshmem}man/man3/shmem_long_finc.3 -${PLIST.oshmem}man/man3/shmem_long_g.3 -${PLIST.oshmem}man/man3/shmem_long_get.3 -${PLIST.oshmem}man/man3/shmem_long_iget.3 -${PLIST.oshmem}man/man3/shmem_long_inc.3 -${PLIST.oshmem}man/man3/shmem_long_iput.3 -${PLIST.oshmem}man/man3/shmem_long_max_to_all.3 -${PLIST.oshmem}man/man3/shmem_long_min_to_all.3 -${PLIST.oshmem}man/man3/shmem_long_or_to_all.3 -${PLIST.oshmem}man/man3/shmem_long_p.3 -${PLIST.oshmem}man/man3/shmem_long_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_long_put.3 -${PLIST.oshmem}man/man3/shmem_long_sum_to_all.3 -${PLIST.oshmem}man/man3/shmem_long_swap.3 -${PLIST.oshmem}man/man3/shmem_long_wait.3 -${PLIST.oshmem}man/man3/shmem_long_wait_until.3 -${PLIST.oshmem}man/man3/shmem_long_xor_to_all.3 -${PLIST.oshmem}man/man3/shmem_longdouble_g.3 -${PLIST.oshmem}man/man3/shmem_longdouble_get.3 -${PLIST.oshmem}man/man3/shmem_longdouble_iget.3 -${PLIST.oshmem}man/man3/shmem_longdouble_iput.3 -${PLIST.oshmem}man/man3/shmem_longdouble_max_to_all.3 -${PLIST.oshmem}man/man3/shmem_longdouble_min_to_all.3 -${PLIST.oshmem}man/man3/shmem_longdouble_p.3 -${PLIST.oshmem}man/man3/shmem_longdouble_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_longdouble_put.3 -${PLIST.oshmem}man/man3/shmem_longlong_add.3 -${PLIST.oshmem}man/man3/shmem_longlong_and_to_all.3 -${PLIST.oshmem}man/man3/shmem_longlong_cswap.3 -${PLIST.oshmem}man/man3/shmem_longlong_fadd.3 -${PLIST.oshmem}man/man3/shmem_longlong_finc.3 -${PLIST.oshmem}man/man3/shmem_longlong_g.3 -${PLIST.oshmem}man/man3/shmem_longlong_get.3 -${PLIST.oshmem}man/man3/shmem_longlong_iget.3 -${PLIST.oshmem}man/man3/shmem_longlong_inc.3 -${PLIST.oshmem}man/man3/shmem_longlong_iput.3 -${PLIST.oshmem}man/man3/shmem_longlong_max_to_all.3 -${PLIST.oshmem}man/man3/shmem_longlong_min_to_all.3 -${PLIST.oshmem}man/man3/shmem_longlong_or_to_all.3 -${PLIST.oshmem}man/man3/shmem_longlong_p.3 -${PLIST.oshmem}man/man3/shmem_longlong_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_longlong_put.3 -${PLIST.oshmem}man/man3/shmem_longlong_sum_to_all.3 -${PLIST.oshmem}man/man3/shmem_longlong_swap.3 -${PLIST.oshmem}man/man3/shmem_longlong_wait.3 -${PLIST.oshmem}man/man3/shmem_longlong_wait_until.3 -${PLIST.oshmem}man/man3/shmem_longlong_xor_to_all.3 -${PLIST.oshmem}man/man3/shmem_malloc.3 -${PLIST.oshmem}man/man3/shmem_my_pe.3 -${PLIST.oshmem}man/man3/shmem_n_pes.3 -${PLIST.oshmem}man/man3/shmem_pe_accessible.3 -${PLIST.oshmem}man/man3/shmem_ptr.3 -${PLIST.oshmem}man/man3/shmem_put128.3 -${PLIST.oshmem}man/man3/shmem_put32.3 -${PLIST.oshmem}man/man3/shmem_put64.3 -${PLIST.oshmem}man/man3/shmem_putmem.3 -${PLIST.oshmem}man/man3/shmem_quiet.3 -${PLIST.oshmem}man/man3/shmem_realloc.3 -${PLIST.oshmem}man/man3/shmem_set_cache_inv.3 -${PLIST.oshmem}man/man3/shmem_set_cache_line_inv.3 -${PLIST.oshmem}man/man3/shmem_set_lock.3 -${PLIST.oshmem}man/man3/shmem_short_and_to_all.3 -${PLIST.oshmem}man/man3/shmem_short_g.3 -${PLIST.oshmem}man/man3/shmem_short_get.3 -${PLIST.oshmem}man/man3/shmem_short_iget.3 -${PLIST.oshmem}man/man3/shmem_short_iput.3 -${PLIST.oshmem}man/man3/shmem_short_max_to_all.3 -${PLIST.oshmem}man/man3/shmem_short_min_to_all.3 -${PLIST.oshmem}man/man3/shmem_short_or_to_all.3 -${PLIST.oshmem}man/man3/shmem_short_p.3 -${PLIST.oshmem}man/man3/shmem_short_prod_to_all.3 -${PLIST.oshmem}man/man3/shmem_short_put.3 -${PLIST.oshmem}man/man3/shmem_short_sum_to_all.3 -${PLIST.oshmem}man/man3/shmem_short_wait.3 -${PLIST.oshmem}man/man3/shmem_short_wait_until.3 -${PLIST.oshmem}man/man3/shmem_short_xor_to_all.3 -${PLIST.oshmem}man/man3/shmem_swap.3 -${PLIST.oshmem}man/man3/shmem_test_lock.3 -${PLIST.oshmem}man/man3/shmem_udcflush.3 -${PLIST.oshmem}man/man3/shmem_udcflush_line.3 -${PLIST.oshmem}man/man3/shmem_wait.3 -${PLIST.oshmem}man/man3/shmem_wait_until.3 -${PLIST.oshmem}man/man3/shmemalign.3 -${PLIST.oshmem}man/man3/shrealloc.3 -${PLIST.oshmem}man/man3/start_pes.3 man/man7/ompi_crcp.7 man/man7/opal_crs.7 man/man7/orte_filem.7 man/man7/orte_hosts.7 man/man7/orte_snapc.7 man/man7/orte_sstore.7 +share/examples/openmpi/openmpi-default-hostfile +share/examples/openmpi/openmpi-mca-params.conf +share/examples/openmpi/pmix-mca-params.conf share/openmpi/amca-param-sets/example.conf -share/openmpi/examples/openmpi-default-hostfile -share/openmpi/examples/openmpi-mca-params.conf share/openmpi/examples/openmpi-totalview.tcl share/openmpi/help-btl-vader.txt share/openmpi/help-coll-sync.txt share/openmpi/help-dash-host.txt -share/openmpi/help-db-base.txt share/openmpi/help-errmgr-base.txt share/openmpi/help-ess-base.txt -share/openmpi/help-ess-hnp.txt share/openmpi/help-hostfile.txt share/openmpi/help-mca-base.txt share/openmpi/help-mca-bml-r2.txt share/openmpi/help-mca-coll-base.txt -share/openmpi/help-mca-op-base.txt +share/openmpi/help-mca-hook-base.txt share/openmpi/help-mca-var.txt share/openmpi/help-mpi-api.txt share/openmpi/help-mpi-btl-base.txt share/openmpi/help-mpi-btl-sm.txt share/openmpi/help-mpi-btl-tcp.txt -share/openmpi/help-mpi-coll-ml.txt share/openmpi/help-mpi-coll-sm.txt share/openmpi/help-mpi-common-sm.txt share/openmpi/help-mpi-errors.txt -share/openmpi/help-mpi-pml-bfo.txt share/openmpi/help-mpi-pml-ob1.txt share/openmpi/help-mpi-runtime.txt share/openmpi/help-mpool-base.txt -share/openmpi/help-ompi-crcp-base.txt -share/openmpi/help-ompi-dpm-base.txt -share/openmpi/help-ompi-dpm-orte.txt -share/openmpi/help-ompi-pubsub-orte.txt share/openmpi/help-oob-base.txt share/openmpi/help-oob-tcp.txt -share/openmpi/help-opal-compress-base.txt -share/openmpi/help-opal-compress-bzip.txt -share/openmpi/help-opal-compress-gzip.txt -share/openmpi/help-opal-crs-base.txt share/openmpi/help-opal-crs-none.txt share/openmpi/help-opal-hwloc-base.txt share/openmpi/help-opal-runtime.txt @@ -903,43 +701,36 @@ share/openmpi/help-opal-util.txt share/openmpi/help-opal-wrapper.txt share/openmpi/help-opal_info.txt share/openmpi/help-orte-clean.txt -share/openmpi/help-orte-filem-base.txt share/openmpi/help-orte-filem-raw.txt share/openmpi/help-orte-info.txt share/openmpi/help-orte-odls-base.txt share/openmpi/help-orte-odls-default.txt -share/openmpi/help-orte-ps.txt +share/openmpi/help-orte-odls-pspawn.txt share/openmpi/help-orte-rmaps-base.txt share/openmpi/help-orte-rmaps-md.txt share/openmpi/help-orte-rmaps-ppr.txt share/openmpi/help-orte-rmaps-resilient.txt share/openmpi/help-orte-rmaps-rr.txt share/openmpi/help-orte-rmaps-seq.txt +share/openmpi/help-orte-rtc-base.txt +share/openmpi/help-orte-rtc-hwloc.txt share/openmpi/help-orte-runtime.txt share/openmpi/help-orte-server.txt share/openmpi/help-orte-snapc-base.txt -share/openmpi/help-orte-sstore-base.txt -share/openmpi/help-orte-top.txt share/openmpi/help-orted.txt share/openmpi/help-orterun.txt -${PLIST.oshmem}share/openmpi/help-oshmem-info.txt -${PLIST.oshmem}share/openmpi/help-oshmem-memheap.txt -${PLIST.oshmem}share/openmpi/help-oshmem-spml-yoda.txt -${PLIST.oshmem}share/openmpi/help-oshmem-sshmem-mmap.txt -${PLIST.oshmem}share/openmpi/help-oshmem-sshmem-sysv.txt -${PLIST.oshmem}share/openmpi/help-oshmem-sshmem.txt +share/openmpi/help-osc-pt2pt.txt share/openmpi/help-plm-base.txt share/openmpi/help-plm-rsh.txt +share/openmpi/help-pmix-base.txt +share/openmpi/help-pmix-pmix3x.txt share/openmpi/help-ras-base.txt ${PLIST.sge}share/openmpi/help-ras-gridengine.txt share/openmpi/help-ras-simulator.txt +share/openmpi/help-rcache-base.txt share/openmpi/help-regex.txt share/openmpi/help-rmaps_rank_file.txt -share/openmpi/help-sec-base.txt -${PLIST.oshmem}share/openmpi/help-shmem-api.txt -${PLIST.oshmem}share/openmpi/help-shmem-runtime.txt -share/openmpi/help-state-staged-hnp.txt -share/openmpi/mca-coll-ml.config +share/openmpi/help-state-base.txt share/openmpi/mpiCC-wrapper-data.txt share/openmpi/mpic++-wrapper-data.txt share/openmpi/mpicc-wrapper-data.txt @@ -949,7 +740,11 @@ share/openmpi/mpif90-wrapper-data.txt share/openmpi/mpifort-wrapper-data.txt share/openmpi/openmpi-valgrind.supp share/openmpi/ortecc-wrapper-data.txt -${PLIST.oshmem}share/openmpi/oshcc-wrapper-data.txt -${PLIST.oshmem}share/openmpi/oshfort-wrapper-data.txt -${PLIST.oshmem}share/openmpi/shmemcc-wrapper-data.txt -${PLIST.oshmem}share/openmpi/shmemfort-wrapper-data.txt +share/pmix/help-pmix-mca-base.txt +share/pmix/help-pmix-mca-var.txt +share/pmix/help-pmix-plog.txt +share/pmix/help-pmix-psensor-file.txt +share/pmix/help-pmix-psensor-heartbeat.txt +share/pmix/help-pmix-runtime.txt +share/pmix/help-pmix-server.txt +share/pmix/pmix-valgrind.supp diff --git a/parallel/openmpi/buildlink3.mk b/parallel/openmpi/buildlink3.mk index abe80bf1a31..6101c143fba 100644 --- a/parallel/openmpi/buildlink3.mk +++ b/parallel/openmpi/buildlink3.mk @@ -1,4 +1,4 @@ -# $NetBSD: buildlink3.mk,v 1.9 2022/06/28 11:35:24 wiz Exp $ +# $NetBSD: buildlink3.mk,v 1.10 2022/08/25 22:09:14 thor Exp $ BUILDLINK_TREE+= openmpi @@ -6,10 +6,8 @@ BUILDLINK_TREE+= openmpi OPENMPI_BUILDLINK3_MK:= BUILDLINK_API_DEPENDS.openmpi+= openmpi>=1.5.1 -BUILDLINK_ABI_DEPENDS.openmpi?= openmpi>=1.10.7nb10 -BUILDLINK_PKGSRCDIR.openmpi?= ../../parallel/openmpi +BUILDLINK_PKGSRCDIR.openmpi?= ../../wip/openmpi -.include "../../parallel/hwloc/buildlink3.mk" .endif # OPENMPI_BUILDLINK3_MK BUILDLINK_TREE+= -openmpi diff --git a/parallel/openmpi/distinfo b/parallel/openmpi/distinfo index dc282b9e4ba..90ecd6af785 100644 --- a/parallel/openmpi/distinfo +++ b/parallel/openmpi/distinfo @@ -1,13 +1,12 @@ -$NetBSD: distinfo,v 1.22 2021/10/26 11:10:37 nia Exp $ +$NetBSD: distinfo,v 1.23 2022/08/25 22:09:14 thor Exp $ -BLAKE2s (openmpi-1.10.7.tar.bz2) = cae7a48509db131afeb7bff30fbf96f301eafb5407bc8f509e6ce9d692b772d2 -SHA512 (openmpi-1.10.7.tar.bz2) = 9c5470f9959ca37650a59e56fb8343c028422c709876ab9d25a411dd09a07cdde927c45d8f3db1ad524b1f2847fe799471d469fa1efee48f8018b2ff24427ecb -Size (openmpi-1.10.7.tar.bz2) = 13435131 bytes -SHA1 (patch-aa) = 6fa20775c6e2abae7c9a2ae858dbb941652beab8 -SHA1 (patch-ai) = 33667fb853caef7ae9a22c7f2e6a016929eb1a13 -SHA1 (patch-aj) = ec79dc2137107d1253e47811c3ea7d00ff988b06 -SHA1 (patch-ak) = fce9064c50f62334ebc30c8488dbf9cc7500a634 +BLAKE2s (openmpi-4.1.4.tar.bz2) = 0d98f1b9404f2a4328288c01d614421ca0a409f7e8550164664a5d692209b4b4 +SHA512 (openmpi-4.1.4.tar.bz2) = c70a92c9b16b8c76a871183f9b180d60861186e64140da897d206d53bc06213f31ea93b31734645f580f4bf28dda5605d85dbce2417e4596955384d961bed653 +Size (openmpi-4.1.4.tar.bz2) = 10042839 bytes +SHA1 (patch-ak) = 1dba883fb533df57f5869b743e499a3117339529 SHA1 (patch-config_opal__setup__wrappers.m4) = c3fe3cb5ff7cedcb5c847f25eea129d4299dd5d2 -SHA1 (patch-configure) = 10b38cc45614258e236b70057c963a0615032e93 +SHA1 (patch-configure) = bb6373289ffa2beabccedb6ead679367c85dbe1e +SHA1 (patch-ompi_mca_io_romio321_romio_configure) = 1adf4e3fff2ece5abba7c5909f006e8345917b9d +SHA1 (patch-ompi_mca_sharedfp_sm_sharedfp__sm.c) = 7ce9147662864be5ae072166231d65189cb1bed2 SHA1 (patch-ompi_mpi_java_java_Makefile.in) = bd61f02f56e03af9799d2ba86d66c1ded35f62f4 -SHA1 (patch-opal_asm_asm-data.txt) = 6f1f6ecb660a67dbc265c6c023dc49c347e8cb9b +SHA1 (patch-opal_tools_wrappers_opal__wrapper.c) = c21620ceab6aff220e6a4b74ce4929ff0d1c9885 diff --git a/parallel/openmpi/options.mk b/parallel/openmpi/options.mk index 2b73732a0d5..32840cbc7c8 100644 --- a/parallel/openmpi/options.mk +++ b/parallel/openmpi/options.mk @@ -1,7 +1,8 @@ -# $NetBSD: options.mk,v 1.10 2018/01/04 20:31:28 adam Exp $ +# $NetBSD: options.mk,v 1.11 2022/08/25 22:09:14 thor Exp $ PKG_OPTIONS_VAR= PKG_OPTIONS.openmpi -PKG_SUPPORTED_OPTIONS= debug f90 java sge +PKG_SUPPORTED_OPTIONS= debug f90 java sge slurm +PKG_SUGGESTED_OPTIONS+= f90 .include "../../mk/bsd.options.mk" @@ -14,12 +15,12 @@ PLIST_VARS+= f08 f90 java sge .if !empty(PKG_OPTIONS:Mf90) USE_LANGUAGES+= fortran GCC_REQD+= 4.7 -GCCDIR= ${PREFIX}/gcc47 CONFIGURE_ARGS+= --enable-mpi-fortran=yes +# Enabling fortran builds for Fortran 90, and also for Fortran 08 if +# the toolchain is good enough. In 2022, start by assuming that +# USE_LANGUAGES=fortran gets us a sufficiently modern compiler. PLIST.f90= yes -. if ${OPSYS} == "Darwin" || ${OPSYS} == "Linux" PLIST.f08= yes -. endif .else CONFIGURE_ARGS+= --enable-mpi-fortran=no .endif @@ -38,3 +39,9 @@ PLIST.sge= yes .else CONFIGURE_ARGS+= --without-sge .endif + +.if !empty(PKG_OPTIONS:Mslurm) +CONFIGURE_ARGS+= --with-slurm +.else +CONFIGURE_ARGS+= --without-slurm +.endif diff --git a/parallel/openmpi/patches/patch-aa b/parallel/openmpi/patches/patch-aa deleted file mode 100644 index b5f4f6ee98e..00000000000 --- a/parallel/openmpi/patches/patch-aa +++ /dev/null @@ -1,23 +0,0 @@ -$NetBSD: patch-aa,v 1.3 2012/05/28 18:38:18 asau Exp $ - -Missing RPATH support. - ---- opal/tools/wrappers/opal_wrapper.c.orig 2011-12-14 05:43:59.000000000 +0400 -+++ opal/tools/wrappers/opal_wrapper.c 2012-02-16 18:10:03.000000000 +0400 -@@ -61,6 +61,7 @@ - #else - #define OPAL_INCLUDE_FLAG "-I" - #define OPAL_LIBDIR_FLAG "-L" -+#define OPAL_RPATH_FLAG "-R" - #endif /* !defined(__WINDOWS__) && defined(_MSC_VER) */ - - struct options_data_t { -@@ -363,6 +364,8 @@ - #else - asprintf(&line, OPAL_LIBDIR_FLAG"%s", - options_data[parse_options_idx].path_libdir); -+ asprintf(&line, OPAL_RPATH_FLAG"%s", -+ options_data[parse_options_idx].path_libdir); - #endif /* defined(__WINDOWS__) */ - opal_argv_append_nosize(&options_data[parse_options_idx].link_flags, line); - free(line); diff --git a/parallel/openmpi/patches/patch-ai b/parallel/openmpi/patches/patch-ai deleted file mode 100644 index 34b3c66ea90..00000000000 --- a/parallel/openmpi/patches/patch-ai +++ /dev/null @@ -1,53 +0,0 @@ -$NetBSD: patch-ai,v 1.6 2016/10/23 14:02:28 asau Exp $ - ---- orte/etc/Makefile.in.orig 2016-09-02 01:30:19.000000000 +0000 -+++ orte/etc/Makefile.in -@@ -1515,6 +1515,7 @@ spml_ucx_LDFLAGS = @spml_ucx_LDFLAGS@ - spml_ucx_LIBS = @spml_ucx_LIBS@ - srcdir = @srcdir@ - sysconfdir = @sysconfdir@ -+sysconfexampledir = $(pkgdatadir)/examples - target = @target@ - target_alias = @target_alias@ - target_cpu = @target_cpu@ -@@ -1731,19 +1732,19 @@ uninstall-am: uninstall-local - # details why the mkdir is in install-data-local. - - install-data-local: -- $(MKDIR_P) $(DESTDIR)$(sysconfdir) -+ $(MKDIR_P) $(DESTDIR)$(sysconfexampledir) - @ p="$(orte_config_files)"; \ - for file in $$p; do \ -- if test -f $(DESTDIR)$(sysconfdir)/$$file; then \ -+ if test -f $(DESTDIR)$(sysconfexampledir)/$$file; then \ - echo "******************************* WARNING ************************************"; \ - echo "*** Not installing new $$file over existing file in:"; \ -- echo "*** $(DESTDIR)$(sysconfdir)/$$file"; \ -+ echo "*** $(DESTDIR)$(sysconfexampledir)/$$file"; \ - echo "******************************* WARNING ************************************"; \ - else \ - if test -f "$$file"; then d=; else d="$(srcdir)/"; fi; \ - f="`echo $$file | sed -e 's|^.*/||'`"; \ -- echo " $(INSTALL_DATA) $$d$$file $(DESTDIR)$(sysconfdir)/$$f"; \ -- $(INSTALL_DATA) $$d$$file $(DESTDIR)$(sysconfdir)/$$f; \ -+ echo " $(INSTALL_DATA) $$d$$file $(DESTDIR)$(sysconfexampledir)/$$f"; \ -+ $(INSTALL_DATA) $$d$$file $(DESTDIR)$(sysconfexampledir)/$$f; \ - fi; \ - done - -@@ -1754,11 +1755,11 @@ install-data-local: - uninstall-local: - @ p="$(orte_config_files)"; \ - for file in $$p; do \ -- if test -f "$(DESTDIR)$(sysconfdir)/$$file"; then \ -+ if test -f "$(DESTDIR)$(sysconfexampledir)/$$file"; then \ - if test -f "$$file"; then d=; else d="$(srcdir)/"; fi; \ -- if diff "$(DESTDIR)$(sysconfdir)/$$file" "$$d$$file" > /dev/null 2>&1 ; then \ -- echo "rm -f $(DESTDIR)$(sysconfdir)/$$file" ; \ -- rm -f "$(DESTDIR)$(sysconfdir)/$$file" ; \ -+ if diff "$(DESTDIR)$(sysconfexampledir)/$$file" "$$d$$file" > /dev/null 2>&1 ; then \ -+ echo "rm -f $(DESTDIR)$(sysconfexampledir)/$$file" ; \ -+ rm -f "$(DESTDIR)$(sysconfexampledir)/$$file" ; \ - fi ; \ - fi ; \ - done diff --git a/parallel/openmpi/patches/patch-aj b/parallel/openmpi/patches/patch-aj deleted file mode 100644 index dcdf22e4426..00000000000 --- a/parallel/openmpi/patches/patch-aj +++ /dev/null @@ -1,60 +0,0 @@ -$NetBSD: patch-aj,v 1.5 2016/10/23 14:02:28 asau Exp $ - ---- opal/etc/Makefile.in.orig 2016-09-02 01:30:16.000000000 +0000 -+++ opal/etc/Makefile.in -@@ -89,6 +89,7 @@ am__make_running_with_option = \ - am__make_dryrun = (target_option=n; $(am__make_running_with_option)) - am__make_keepgoing = (target_option=k; $(am__make_running_with_option)) - pkgdatadir = $(datadir)/@PACKAGE@ -+sysconfexampledir = $(pkgdatadir)/examples - pkgincludedir = $(includedir)/@PACKAGE@ - pkglibdir = $(libdir)/@PACKAGE@ - pkglibexecdir = $(libexecdir)/@PACKAGE@ -@@ -1730,24 +1731,24 @@ uninstall-am: uninstall-local - # details why the mkdir is in install-data-local. - - install-data-local: -- $(MKDIR_P) $(DESTDIR)$(sysconfdir) -+ $(MKDIR_P) $(DESTDIR)$(sysconfexampledir) - @ p="$(opal_config_files)"; \ - if test "$(opal_file_from_platform)" = "yes"; then \ - if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \ -- echo " $(INSTALL_DATA) $$d$$p $(DESTDIR)$(sysconfdir)/openmpi-mca-params.conf"; \ -- $(INSTALL_DATA) $$d$$p $(DESTDIR)$(sysconfdir)/openmpi-mca-params.conf; \ -+ echo " $(INSTALL_DATA) $$d$$p $(DESTDIR)$(sysconfexampledir)/openmpi-mca-params.conf"; \ -+ $(INSTALL_DATA) $$d$$p $(DESTDIR)$(sysconfexampledir)/openmpi-mca-params.conf; \ - else \ - for file in $$p; do \ -- if test -f $(DESTDIR)$(sysconfdir)/openmpi-mca-params.conf; then \ -+ if test -f $(DESTDIR)$(sysconfexampledir)/openmpi-mca-params.conf; then \ - echo "******************************* WARNING ************************************"; \ - echo "*** Not installing new $$file over existing file in:"; \ -- echo "*** $(DESTDIR)$(sysconfdir)/$$file"; \ -+ echo "*** $(DESTDIR)$(sysconfexampledir)/$$file"; \ - echo "******************************* WARNING ************************************"; \ - else \ - if test -f "$$file"; then d=; else d="$(srcdir)/"; fi; \ - f="`echo $$file | sed -e 's|^.*/||'`"; \ -- echo " $(INSTALL_DATA) $$d$$file $(DESTDIR)$(sysconfdir)/$$f"; \ -- $(INSTALL_DATA) $$d$$file $(DESTDIR)$(sysconfdir)/$$f; \ -+ echo " $(INSTALL_DATA) $$d$$file $(DESTDIR)$(sysconfexampledir)/$$f"; \ -+ $(INSTALL_DATA) $$d$$file $(DESTDIR)$(sysconfexampledir)/$$f; \ - fi; \ - done \ - fi; -@@ -1759,11 +1760,11 @@ install-data-local: - uninstall-local: - @ p="$(opal_config_files)"; \ - for file in $$p; do \ -- if test -f "$(DESTDIR)$(sysconfdir)/$$file"; then \ -+ if test -f "$(DESTDIR)$(sysconfexampledir)/$$file"; then \ - if test -f "$$file"; then d=; else d="$(srcdir)/"; fi; \ -- if diff "$(DESTDIR)$(sysconfdir)/$$file" "$$d$$file" > /dev/null 2>&1 ; then \ -- echo "rm -f $(DESTDIR)$(sysconfdir)/$$file" ; \ -- rm -f "$(DESTDIR)$(sysconfdir)/$$file" ; \ -+ if diff "$(DESTDIR)$(sysconfexampledir)/$$file" "$$d$$file" > /dev/null 2>&1 ; then \ -+ echo "rm -f $(DESTDIR)$(sysconfexampledir)/$$file" ; \ -+ rm -f "$(DESTDIR)$(sysconfexampledir)/$$file" ; \ - fi ; \ - fi ; \ - done diff --git a/parallel/openmpi/patches/patch-ak b/parallel/openmpi/patches/patch-ak index 7387adac0f3..09acc4fe138 100644 --- a/parallel/openmpi/patches/patch-ak +++ b/parallel/openmpi/patches/patch-ak @@ -1,4 +1,6 @@ -$NetBSD: patch-ak,v 1.5 2016/10/23 14:02:28 asau Exp $ +$NetBSD: patch-ak,v 1.6 2022/08/25 22:09:14 thor Exp $ + +# Use pkgsrc variables --- ompi/etc/Makefile.in.orig 2016-09-02 01:30:09.000000000 +0000 +++ ompi/etc/Makefile.in diff --git a/parallel/openmpi/patches/patch-configure b/parallel/openmpi/patches/patch-configure index 596039e0b62..ec0b87d0200 100644 --- a/parallel/openmpi/patches/patch-configure +++ b/parallel/openmpi/patches/patch-configure @@ -1,171 +1,69 @@ -$NetBSD: patch-configure,v 1.2 2016/10/23 14:02:28 asau Exp $ +$NetBSD: patch-configure,v 1.3 2022/08/25 22:09:14 thor Exp $ ---- configure.orig 2016-09-02 01:30:27.000000000 +0000 +# Portability of test command + +--- configure.orig 2022-07-29 20:55:26.095390777 +0000 +++ configure -@@ -314733,166 +314734,6 @@ $as_echo "$as_me: WARNING: This usually - done +@@ -156118,7 +156118,7 @@ $as_echo_n "checking if memory patcher s + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $opal_memory_patcher_happy" >&5 + $as_echo "$opal_memory_patcher_happy" >&6; } + +- if test "$opal_memory_patcher_happy" == "yes"; then : ++ if test "$opal_memory_patcher_happy" = "yes"; then : + + for ac_func in __curbrk + do : +@@ -338377,7 +338377,7 @@ cat >>confdefs.h <<_ACEOF + #define OMPI_MCA_OP_HAVE_SSE3 $op_sse3_support + _ACEOF + +- if test "$op_avx512_support" == "1"; then ++ if test "$op_avx512_support" = "1"; then + MCA_BUILD_ompi_op_has_avx512_support_TRUE= + MCA_BUILD_ompi_op_has_avx512_support_FALSE='#' + else +@@ -338385,7 +338385,7 @@ else + MCA_BUILD_ompi_op_has_avx512_support_FALSE= + fi +- if test "$op_avx2_support" == "1"; then ++ if test "$op_avx2_support" = "1"; then + MCA_BUILD_ompi_op_has_avx2_support_TRUE= + MCA_BUILD_ompi_op_has_avx2_support_FALSE='#' + else +@@ -338393,7 +338393,7 @@ else + MCA_BUILD_ompi_op_has_avx2_support_FALSE= + fi -- # If we found RPATH support, check for RUNPATH support, too -- if test "$WRAPPER_RPATH_SUPPORT" = "rpath"; then : -- -- -- -- # Is the private index set? If not, set it. -- if test "x$ompi_scope_index" = "x"; then -- ompi_scope_index=1 -- fi -- -- # First, check to see if any of these variables are already set. -- # This is a simple sanity check to ensure we're not already -- # overwriting pre-existing variables (that have a non-empty -- # value). It's not a perfect check, but at least it's something. -- for ompi_var in LDFLAGS_save rpath_script rpath_outfile wl_fc; do -- ompi_str="ompi_str=\"\$$ompi_var\"" -- eval $ompi_str -- -- if test "x$ompi_str" != "x"; then -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: Found configure shell variable clash!" >&5 --$as_echo "$as_me: WARNING: Found configure shell variable clash!" >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: OPAL_VAR_SCOPE_PUSH called on \"$ompi_var\"," >&5 --$as_echo "$as_me: WARNING: OPAL_VAR_SCOPE_PUSH called on \"$ompi_var\"," >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: but it is already defined with value \"$ompi_str\"" >&5 --$as_echo "$as_me: WARNING: but it is already defined with value \"$ompi_str\"" >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: This usually indicates an error in configure." >&5 --$as_echo "$as_me: WARNING: This usually indicates an error in configure." >&2;} -- as_fn_error $? "Cannot continue" "$LINENO" 5 -- fi -- done -- -- # Ok, we passed the simple sanity check. Save all these names so -- # that we can unset them at the end of the scope. -- ompi_str="ompi_scope_$ompi_scope_index=\"LDFLAGS_save rpath_script rpath_outfile wl_fc\"" -- eval $ompi_str -- unset ompi_str -- -- env | grep ompi_scope -- ompi_scope_index=`expr $ompi_scope_index + 1` -- -- -- { $as_echo "$as_me:${as_lineno-$LINENO}: checking if linker supports RUNPATH" >&5 --$as_echo_n "checking if linker supports RUNPATH... " >&6; } -- # Set the output in $runpath_args -- runpath_args= -- LDFLAGS_save=$LDFLAGS -- LDFLAGS="$LDFLAGS -Wl,--enable-new-dtags" -- ac_ext=c --ac_cpp='$CPP $CPPFLAGS' --ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' --ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' --ac_compiler_gnu=$ac_cv_c_compiler_gnu -- -- cat confdefs.h - <<_ACEOF >conftest.$ac_ext --/* end confdefs.h. */ -- --int --main () --{ --return 7; -- ; -- return 0; --} --_ACEOF --if ac_fn_c_try_link "$LINENO"; then : -- WRAPPER_RPATH_SUPPORT=runpath -- runpath_args="-Wl,--enable-new-dtags" -- { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes (-Wl,--enable-new-dtags)" >&5 --$as_echo "yes (-Wl,--enable-new-dtags)" >&6; } --else -- { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 --$as_echo "no" >&6; } --fi --rm -f core conftest.err conftest.$ac_objext \ -- conftest$ac_exeext conftest.$ac_ext -- ac_ext=c --ac_cpp='$CPP $CPPFLAGS' --ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' --ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' --ac_compiler_gnu=$ac_cv_c_compiler_gnu -- -- # Output goes into globally-visible $rpath_args. Run this in a -- # sub-process so that we don't pollute the current process -- # environment. -- rpath_script=conftest.$$.sh -- rpath_outfile=conftest.$$.out -- rm -f $rpath_script $rpath_outfile -- cat > $rpath_script <<EOF --#!/bin/sh -- --# Slurp in the libtool config into my environment -- --# Apparently, "libtoool --config" calls "exit", so we can't source it --# (because if script A sources script B, and B calls "exit", then both --# B and A will exit). Instead, we have to send the output to a file --# and then source that. --$OMPI_TOP_BUILDDIR/libtool --tag=FC --config > $rpath_outfile -- --chmod +x $rpath_outfile --. ./$rpath_outfile --rm -f $rpath_outfile -- --wl="\`eval echo \$wl\`" --echo \$wl -- --# Done --exit 0 --EOF -- chmod +x $rpath_script -- wl_fc=`./$rpath_script` -- rm -f $rpath_script -- -- LDFLAGS="$LDFLAGS_save ${wl_fc}--enable-new-dtags" -- ac_ext=${ac_fc_srcext-f} --ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5' --ac_link='$FC -o conftest$ac_exeext $FCFLAGS $LDFLAGS $ac_fcflags_srcext conftest.$ac_ext $LIBS >&5' --ac_compiler_gnu=$ac_cv_fc_compiler_gnu -- -- cat > conftest.$ac_ext <<_ACEOF --program test --end program --_ACEOF --if ac_fn_fc_try_link "$LINENO"; then : -- runpath_fc_args="${wl_fc}--enable-new-dtags" --else -- runpath_fc_args="" --fi --rm -f core conftest.err conftest.$ac_objext \ -- conftest$ac_exeext conftest.$ac_ext -- ac_ext=c --ac_cpp='$CPP $CPPFLAGS' --ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' --ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' --ac_compiler_gnu=$ac_cv_c_compiler_gnu -- -- LDFLAGS=$LDFLAGS_save -- -- -- # Unwind the index -- ompi_scope_index=`expr $ompi_scope_index - 1` -- ompi_scope_test=`expr $ompi_scope_index \> 0` -- if test "$ompi_scope_test" = "0"; then -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: OPAL_VAR_SCOPE_POP popped too many OMPI configure scopes." >&5 --$as_echo "$as_me: WARNING: OPAL_VAR_SCOPE_POP popped too many OMPI configure scopes." >&2;} -- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: This usually indicates an error in configure." >&5 --$as_echo "$as_me: WARNING: This usually indicates an error in configure." >&2;} -- as_fn_error $? "Cannot continue" "$LINENO" 5 -- fi -- -- # Get the variable names from that index -- ompi_str="ompi_str=\"\$ompi_scope_$ompi_scope_index\"" -- eval $ompi_str -- -- # Iterate over all the variables and unset them all -- for ompi_var in $ompi_str; do -- unset $ompi_var -- done -- -- --fi +- if test "$op_avx_support" == "1"; then ++ if test "$op_avx_support" = "1"; then + MCA_BUILD_ompi_op_has_avx_support_TRUE= + MCA_BUILD_ompi_op_has_avx_support_FALSE='#' + else +@@ -338401,7 +338401,7 @@ else + MCA_BUILD_ompi_op_has_avx_support_FALSE= + fi +- if test "$op_sse41_support" == "1"; then ++ if test "$op_sse41_support" = "1"; then + MCA_BUILD_ompi_op_has_sse41_support_TRUE= + MCA_BUILD_ompi_op_has_sse41_support_FALSE='#' + else +@@ -338409,7 +338409,7 @@ else + MCA_BUILD_ompi_op_has_sse41_support_FALSE= fi - if test "$enable_wrapper_rpath" = "yes" -a "$WRAPPER_RPATH_SUPPORT" = "disabled"; then : + +- if test "$op_sse3_support" == "1"; then ++ if test "$op_sse3_support" = "1"; then + MCA_BUILD_ompi_op_has_sse3_support_TRUE= + MCA_BUILD_ompi_op_has_sse3_support_FALSE='#' + else +@@ -361527,7 +361527,7 @@ if test "${with_ompi_pmix_rte+set}" = se + withval=$with_ompi_pmix_rte; + fi + +- if test "$with_ompi_pmix_rte" == "yes"; then : ++ if test "$with_ompi_pmix_rte" = "yes"; then : + should_build=$should_build + { $as_echo "$as_me:${as_lineno-$LINENO}: PMIx RTE selected by user" >&5 + $as_echo "$as_me: PMIx RTE selected by user" >&6;} diff --git a/parallel/openmpi/patches/patch-ompi_mca_io_romio321_romio_configure b/parallel/openmpi/patches/patch-ompi_mca_io_romio321_romio_configure new file mode 100644 index 00000000000..d9153ecb5a5 --- /dev/null +++ b/parallel/openmpi/patches/patch-ompi_mca_io_romio321_romio_configure @@ -0,0 +1,15 @@ +$NetBSD: patch-ompi_mca_io_romio321_romio_configure,v 1.1 2022/08/25 22:09:14 thor Exp $ + +# POSIX sh compat + +--- ompi/mca/io/romio321/romio/configure.orig 2019-02-05 14:00:57.202743253 +0000 ++++ ompi/mca/io/romio321/romio/configure +@@ -22997,7 +22997,7 @@ if test "${with_aio_lite+set}" = set; th + withval=$with_aio_lite; with_aiolite=yes + fi + +-if test "x$with_aiolite" == xyes; then : ++if test "x$with_aiolite" = xyes; then : + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for lio_listio in -laio-lite" >&5 + $as_echo_n "checking for lio_listio in -laio-lite... " >&6; } + if ${ac_cv_lib_aio_lite_lio_listio+:} false; then : diff --git a/parallel/openmpi/patches/patch-ompi_mca_sharedfp_sm_sharedfp__sm.c b/parallel/openmpi/patches/patch-ompi_mca_sharedfp_sm_sharedfp__sm.c new file mode 100644 index 00000000000..c11b88bacbd --- /dev/null +++ b/parallel/openmpi/patches/patch-ompi_mca_sharedfp_sm_sharedfp__sm.c @@ -0,0 +1,14 @@ +$NetBSD: patch-ompi_mca_sharedfp_sm_sharedfp__sm.c,v 1.1 2022/08/25 22:09:14 thor Exp $ + +# Fix missing constants + +--- ompi/mca/sharedfp/sm/sharedfp_sm.c.orig 2022-07-29 23:04:14.067867314 +0000 ++++ ompi/mca/sharedfp/sm/sharedfp_sm.c +@@ -26,6 +26,7 @@ + * modules just to query their version and parameters + */ + ++#include <sys/stat.h> // Hack for NetBSD + #include "ompi_config.h" + #include "mpi.h" + #include "ompi/mca/sharedfp/sharedfp.h" diff --git a/parallel/openmpi/patches/patch-opal_asm_asm-data.txt b/parallel/openmpi/patches/patch-opal_asm_asm-data.txt deleted file mode 100644 index d3b33bf2166..00000000000 --- a/parallel/openmpi/patches/patch-opal_asm_asm-data.txt +++ /dev/null @@ -1,14 +0,0 @@ -$NetBSD: patch-opal_asm_asm-data.txt,v 1.1 2020/02/06 11:28:49 jperkin Exp $ - -Add support for SunOS/x86_64. - ---- opal/asm/asm-data.txt.orig 2016-08-24 14:54:58.000000000 +0000 -+++ opal/asm/asm-data.txt -@@ -44,6 +44,7 @@ ALPHA default-.text-.globl-:--$-@-1-1-1- - ###################################################################### - - AMD64 default-.text-.globl-:--.L-@-1-0-1-1-1 amd64-linux -+AMD64 default-.text-.globl-:--.L-#-1-0-1-1-0 amd64-linux - AMD64 default-.text-.globl-:--.L-@-1-0-1-1-0 amd64-linux-nongas - - diff --git a/parallel/openmpi/patches/patch-opal_tools_wrappers_opal__wrapper.c b/parallel/openmpi/patches/patch-opal_tools_wrappers_opal__wrapper.c new file mode 100644 index 00000000000..e9b70a8f591 --- /dev/null +++ b/parallel/openmpi/patches/patch-opal_tools_wrappers_opal__wrapper.c @@ -0,0 +1,32 @@ +$NetBSD: patch-opal_tools_wrappers_opal__wrapper.c,v 1.1 2022/08/25 22:09:14 thor Exp $ + +# Add rpath support + +--- opal/tools/wrappers/opal_wrapper.c.orig 2022-07-30 14:00:47.068421047 +0000 ++++ opal/tools/wrappers/opal_wrapper.c +@@ -57,6 +57,7 @@ + + #define OPAL_INCLUDE_FLAG "-I" + #define OPAL_LIBDIR_FLAG "-L" ++#define OPAL_RPATH_FLAG "-R" + + struct options_data_t { + char **compiler_args; +@@ -347,6 +348,8 @@ data_callback(const char *key, const cha + char *line; + asprintf(&line, OPAL_INCLUDE_FLAG"%s", + options_data[parse_options_idx].path_opalincludedir); ++ asprintf(&line, OPAL_RPATH_FLAG"%s", ++ options_data[parse_options_idx].path_libdir); + opal_argv_append_nosize(&options_data[parse_options_idx].preproc_flags, line); + free(line); + } +@@ -358,6 +361,8 @@ data_callback(const char *key, const cha + char *line; + asprintf(&line, OPAL_LIBDIR_FLAG"%s", + options_data[parse_options_idx].path_opallibdir); ++ asprintf(&line, OPAL_RPATH_FLAG"%s", ++ options_data[parse_options_idx].path_libdir); + opal_argv_append_nosize(&options_data[parse_options_idx].link_flags, line); + free(line); + } |