pkgsrc - [no description]

Age	Commit message (Collapse)	Author	Files	Lines
2021-10-26	biology: Replace RMD160 checksums with BLAKE2s checksums	nia	1	-2/+2
	All checksums have been double-checked against existing RMD160 and SHA512 hashes
2021-10-07	biology: Remove SHA1 hashes for distfiles	nia	1	-2/+1

2020-10-12	math/blas, math/lapack: Install interchangeable BLAS system	bacon	1	-3/+3
	Install the new interchangeable BLAS system created by Thomas Orgis, currently supporting Netlib BLAS/LAPACK, OpenBLAS, cblas, lapacke, and Apple's Accelerate.framework. This system allows the user to select any BLAS implementation without modifying packages or using package options, by setting PKGSRC_BLAS_TYPES in mk.conf. See mk/blas.buildlink3.mk for details. This commit should not alter behavior of existing packages as the system defaults to Netlib BLAS/LAPACK, which until now has been the only supported implementation. Details: Add new mk/blas.buildlink3.mk for inclusion in dependent packages Install compatible Netlib math/blas and math/lapack packages Update math/blas and math/lapack MAINTAINER approved by adam@ OpenBLAS, cblas, and lapacke will follow in separate commits Update direct dependents to use mk/blas.buildlink3.mk Perform recursive revbump
2019-01-13	Multiple packages: Replace obsolete maintainer email	bacon	1	-2/+2
	jwbacon@tds.net ==> bacon@NetBSD.org
2018-01-01	Cleanup: replace curly braces with parentheses.	rillig	1	-6/+6

2017-09-03	Comment out dead MASTER_SITES/HOMEPAGEs.	wiz	1	-3/+3

2016-02-25	Use OPSYSVARS.	jperkin	1	-5/+2

2015-12-29	Whitespace.	dholland	1	-2/+2

2015-11-02	Add SHA512 digests for distfiles for biology category.	agc	1	-1/+2
	Existing SHA1 digests verified, all found to be the same on the machine holding the existing distfiles (morden). Existing SHA1 digests retained for now as an audit trail.
2013-12-10	Add socket libraries on SunOS. Patch from Sebastian Wiedenroth.	jperkin	1	-1/+6

2012-11-16	Don't redefine local variables.	joerg	4	-1/+72

2012-09-14	Fix PKGNAME.	asau	1	-1/+2

2012-09-14	Remove errorneously imported backup file. (Why was it not ignored??)	asau	1	-1/+0

2012-09-14	Import PLINK 1.07 as biology/plink	asau	6	-0/+134
	From Jason Bacon via pkgsrc-wip. PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. The focus of PLINK is purely on analysis of genotype/phenotype data, so there is no support for steps prior to this (e.g. study design and planning, generating genotype or CNV calls from raw data). Through integration with gPLINK and Haploview, there is some support for the subsequent visualization, annotation and storage of results.