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# $NetBSD: Makefile,v 1.1 2018/11/15 09:21:24 adam Exp $
DISTNAME= bcftools-1.9
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/}
EXTRACT_SUFX= .tar.bz2
GITHUB_RELEASE= ${PKGVERSION_NOREV}
MAINTAINER= pkgsrc-users@NetBSD.org
HOMEPAGE= http://samtools.github.io/bcftools/
COMMENT= Calling and manipulating files VCF and BCF formats
LICENSE= mit
USE_TOOLS+= gmake perl
GNU_CONFIGURE= yes
CONFIGURE_ARGS+= --with-htslib=system
TEST_TARGET= test
BUILDLINK_TRANSFORM+= opt:-ldl:${BUILDLINK_LDADD.dl:M*}
REPLACE_PERL+= misc/*.pl
REPLACE_PERL+= misc/plot-vcfstats
REPLACE_PYTHON+= misc/*.py
.include "../../biology/htslib/buildlink3.mk"
.include "../../lang/python/application.mk"
.include "../../mk/dlopen.buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
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