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# $NetBSD: Makefile,v 1.3 2022/06/30 11:18:04 nia Exp $
DISTNAME= bedtools-2.30.0
PKGREVISION= 1
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=arq5x/}
GITHUB_PROJECT= bedtools2
GITHUB_TAG= v${PKGVERSION_NOREV}
MAINTAINER= bacon@NetBSD.org
HOMEPAGE= https://bedtools.readthedocs.io/en/latest/
COMMENT= Swiss army knife for genome arithmetic
LICENSE= mit
USE_LANGUAGES= c c++
USE_TOOLS+= bash:test gmake
REPLACE_SH+= scripts/vcfsort.sh
REPLACE_PYTHON= scripts/makeBashScripts.py
SUBST_CLASSES+= pybin
SUBST_STAGE.pybin= pre-configure
SUBST_SED.pybin= -e 's|python|${PYTHONBIN}|g'
SUBST_FILES.pybin= Makefile
do-test:
cd ${WRKSRC}/test && bash test.sh
.include "../../devel/zlib/buildlink3.mk"
.include "../../archivers/bzip2/buildlink3.mk"
.include "../../archivers/xz/buildlink3.mk"
.include "../../lang/python/application.mk"
.include "../../mk/bsd.pkg.mk"
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