blob: 1f88345abe09ce5eb5dc2ec0a7d42b0e4f129921 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
|
@comment $NetBSD: PLIST,v 1.1 2019/01/07 02:33:17 bacon Exp $
bin/alignGFA
bin/bogart
bin/bogus
bin/canu
bin/correctOverlaps
bin/dumpBlob
bin/edalign
bin/errorEstimate
bin/falconsense
bin/fastqAnalyze
bin/fastqSample
bin/fastqSimulate
bin/fastqSimulate-sort
bin/filterCorrectionLayouts
bin/filterCorrectionOverlaps
bin/findErrors
bin/findErrors-Dump
bin/generateCorrectionLayouts
bin/loadCorrectedReads
bin/loadErates
bin/loadTrimmedReads
bin/meryl
bin/mhapConvert
bin/mmapConvert
bin/ovStoreBucketizer
bin/ovStoreBuild
bin/ovStoreConfig
bin/ovStoreDump
bin/ovStoreIndexer
bin/ovStoreSorter
bin/ovStoreStats
bin/overlapConvert
bin/overlapImport
bin/overlapInCore
bin/overlapInCorePartition
bin/overlapPair
bin/prefixEditDistance-matchLimitGenerate
bin/readConsensus
bin/sequence
bin/splitHaplotype
bin/splitReads
bin/sqStoreCreate
bin/sqStoreCreatePartition
bin/sqStoreDumpFASTQ
bin/sqStoreDumpMetaData
bin/tgStoreCompress
bin/tgStoreCoverageStat
bin/tgStoreDump
bin/tgStoreFilter
bin/tgStoreLoad
bin/tgTigDisplay
bin/trimReads
bin/utgcns
bin/wtdbgConvert
lib/perl5/site_perl/canu/Configure.pm
lib/perl5/site_perl/canu/Consensus.pm
lib/perl5/site_perl/canu/CorrectReads.pm
lib/perl5/site_perl/canu/Defaults.pm
lib/perl5/site_perl/canu/Execution.pm
lib/perl5/site_perl/canu/Grid.pm
lib/perl5/site_perl/canu/Grid_Cloud.pm
lib/perl5/site_perl/canu/Grid_DNANexus.pm
lib/perl5/site_perl/canu/Grid_LSF.pm
lib/perl5/site_perl/canu/Grid_PBSTorque.pm
lib/perl5/site_perl/canu/Grid_SGE.pm
lib/perl5/site_perl/canu/Grid_Slurm.pm
lib/perl5/site_perl/canu/HaplotypeReads.pm
lib/perl5/site_perl/canu/Meryl.pm
lib/perl5/site_perl/canu/Output.pm
lib/perl5/site_perl/canu/OverlapBasedTrimming.pm
lib/perl5/site_perl/canu/OverlapErrorAdjustment.pm
lib/perl5/site_perl/canu/OverlapInCore.pm
lib/perl5/site_perl/canu/OverlapMMap.pm
lib/perl5/site_perl/canu/OverlapMhap.pm
lib/perl5/site_perl/canu/OverlapStore.pm
lib/perl5/site_perl/canu/Report.pm
lib/perl5/site_perl/canu/SequenceStore.pm
lib/perl5/site_perl/canu/Unitig.pm
share/java/classes/mhap-2.1.3.jar
|