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# $NetBSD: Makefile,v 1.2 2016/07/09 06:37:51 wiz Exp $
#
###########################################################
# Generated by fbsd2pkg #
###########################################################
DISTNAME= cdhit-4.6.4
PKGREVISION= 1
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=weizhongli/}
GITHUB_TAG= V${PKGVERSION_NOREV}
MAINTAINER= jwbacon@tds.net
HOMEPAGE= http://weizhong-lab.ucsd.edu/cd-hit/
COMMENT= Clustering and comparing protein or nucleotide sequences
LICENSE= gnu-gpl-v2
USE_LANGUAGES= c++
USE_TOOLS+= bash:run gmake perl
REPLACE_PERL= *.pl
# Restore default overridden by GITHUB_TAG
WRKSRC= ${WRKDIR}/${DISTNAME}
SUBST_CLASSES+= compiler
SUBST_STAGE.compiler= post-patch
SUBST_MESSAGE.compiler= Fixing hardcoded compiler name
SUBST_FILES.compiler= ${MAKE_FILE}
SUBST_SED.compiler= -e 's|g++|${CXX:Q}|g'
SUBST_CLASSES+= bash
SUBST_STAGE.bash= post-patch
SUBST_MESSAGE.bash= Fixing bash path
SUBST_FILES.bash= cd-hit-2d-para.pl cd-hit-para.pl
SUBST_SED.bash= -e 's|/bin/bash|${PREFIX}/bin/bash|g'
MAKE_FLAGS+= openmp=yes PREFIX=${DESTDIR}${PREFIX}/bin
DOCDIR= ${PREFIX}/share/doc/cdhit
INSTALLATION_DIRS+= bin ${DOCDIR}
post-install:
${INSTALL_DATA} ${WRKSRC}/doc/cdhit-user-guide.pdf ${DESTDIR}${DOCDIR}
.include "../../mk/bsd.pkg.mk"
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