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# $NetBSD: Makefile,v 1.1 2021/02/24 13:54:25 bacon Exp $
DISTNAME= IGV_2.9.2
PKGNAME= ${DISTNAME:S/IGV_/igv-/}
CATEGORIES= biology
MASTER_SITES= https://data.broadinstitute.org/igv/projects/downloads/${PKGVERSION_NOREV:R}/
EXTRACT_SUFX= .zip
MAINTAINER= bacon@NetBSD.org
HOMEPAGE= https://software.broadinstitute.org/software/igv/
COMMENT= Visualization tool for genomic datasets
LICENSE= mit
USE_JAVA= yes
USE_JAVA2= 9 # Actually needs 11, not supported by java-vm.mk
USE_TOOLS+= pax
NO_BUILD= yes
SUBST_CLASSES+= java
SUBST_STAGE.java= pre-configure
SUBST_SED.java= -e 's|%%JAVAJARDIR%%|${JAVAJARDIR}|g'
SUBST_SED.java+= -e 's|%%PREFIX%%|${PREFIX}|g'
SUBST_FILES.java= igv
JAVAJARDIR= ${PREFIX}/share/java/classes
INSTALLATION_DIRS= bin ${JAVAJARDIR}/igv
pre-patch:
${CP} ${FILESDIR}/igv.sh.in ${WRKSRC}/igv
do-install:
${INSTALL_SCRIPT} ${WRKSRC}/igv ${DESTDIR}${PREFIX}/bin
${INSTALL_DATA} ${WRKSRC}/lib/*.jar ${DESTDIR}${JAVAJARDIR}/igv
${INSTALL_DATA} ${WRKSRC}/igv.args ${DESTDIR}${JAVAJARDIR}/igv
cd ${WRKSRC}/lib && pax -rw genomes ${DESTDIR}${JAVAJARDIR}/igv
.include "../../mk/bsd.pkg.mk"
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