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|
#!/bin/sh
# $NetBSD: R2pkg.sh,v 1.13 2019/10/19 18:47:59 rillig Exp $
#
# Copyright (c) 2014,2015,2016,2017,2018,2019
# Brook Milligan. All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions
# are met:
# 1. Redistributions of source code must retain the above copyright
# notice, this list of conditions and the following disclaimer.
# 2. Redistributions in binary form must reproduce the above copyright
# notice, this list of conditions and the following disclaimer in the
# documentation and/or other materials provided with the distribution.
# 3. Neither the name of the author nor the names of any contributors
# may be used to endorse or promote products derived from this software
# without specific prior written permission.
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
# ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS OR CONTRIBUTORS BE LIABLE
# FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
# DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
# OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
# HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
# LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
# OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
# SUCH DAMAGE.
#
#
# Create an R package in the current directory
#
set -u
name="R2pkg"
vers="@VERS@"
r2pkg=$0
usage="$name [-cDehqruVv] [-E editor] [-M maintainer] [package] -- create an R package for pkgsrc"
: "${CRAN_URL:=ftp://cran.r-project.org}"
: "${PKGEDITOR:=${EDITOR:=vi}}"
: "${TMPDIR:=/tmp}"
# Substituted by pkgsrc at pre-configure time.
make=@MAKE@
level=0
maintainer_email="pkgsrc-users@NetBSD.org"
pid=$$
quiet=false
recursive=false
update=false
use_editor=yes
verbose=0
keep_description=no
args=""
while getopts cDehqruVvE:M:L:P: arg
do
case $arg in
# options without arguments
c) args="$args $arg"; update=false;;
D) args="$args $arg"; keep_description=yes;;
e) args="$args $arg"; use_editor=no;;
h) echo "$usage"; exit 0;;
q) args="$args $arg"; quiet=true;;
r) args="$args $arg"; recursive=true;;
u) args="$args $arg"; update=true;;
V) echo "$name v$vers"; exit 0;;
v) args="$args $arg"; verbose=$((verbose + 1));;
# options taking arguments
E) args="$args $arg $OPTARG"; PKGEDITOR=$OPTARG;;
M) args="$args $arg $OPTARG"; maintainer_email=$OPTARG;;
# options for recursion; only for internal use
L) level=$((OPTARG + 0));;
P) pid=$((OPTARG + 0));;
# unknown options
\?) echo "$usage" 1>&2; exit 1;;
esac
done
shift $((OPTIND - 1))
# Update $args for recursive call
args="$args -L $((level + 1)) -P $pid"
if [ ${#} -eq 0 ]; then
rpkg=$(basename "$(pwd)" | sed -e 's/^R-//')
elif [ ${#} -eq 1 ]; then
rpkg=$1
else
echo "Error: multiple package names given." 1>&2
echo "$usage" 1>&2
exit 1
fi
if [ $update = true ] && [ -r Makefile ]; then
banner_msg="[ $level ] ===> Updating R package R-$rpkg in $(pwd)"
else
banner_msg="[ $level ] ===> Creating R package R-$rpkg in $(pwd)"
fi
packages_list=$TMPDIR/R2pkg.packages.$pid
dependency_list=$TMPDIR/R2pkg.depends.$pid
echo_verbose0() { echo "$@"; }
echo_verbose1() { :; }
show_verbose2() { "$@" >/dev/null; }
quiet_curl="TRUE"
if [ $quiet = true ]; then
echo_verbose0() { :; }
elif [ $verbose -eq 1 ]; then
echo_verbose1() { echo "$@"; }
elif [ $verbose -gt 1 ]; then
echo_verbose1() { echo "$@"; }
show_verbose2() { "$@"; }
quiet_curl="FALSE"
fi
rpkg_description_url=$CRAN_URL/pub/R/web/packages/$rpkg/DESCRIPTION
exists ()
{
case "$#,$*" in (1,*\**) return 1;; esac
return 0
}
check_for_R ()
{
Rscript --no-save /dev/null && return
echo "ERROR: math/R package is not installed." 1>&2
exit 1
}
check_for_no_recursion ()
{
touch "$packages_list"
grep -E -q -e "$rpkg" "$packages_list" \
&& echo "ERROR: circular dependency" 1>&2
echo "$rpkg" >> "$packages_list"
}
preserve_original_content ()
{
[ -f DESCR ] && mv DESCR DESCR.orig
[ -f Makefile ] && mv Makefile Makefile.orig
[ -f buildlink3.mk ] && mv buildlink3.mk buildlink3.mk.orig
[ -f distinfo ] && mv distinfo distinfo.orig
}
make_package ()
{
env LEVEL="$level" rpkg="$rpkg" PACKAGES_LIST="$packages_list" \
R2PKG="$r2pkg" ARGS="$args" RECURSIVE="$recursive" \
UPDATE="$update" DEPENDENCY_LIST="$dependency_list" \
MAINTAINER_EMAIL="$maintainer_email" \
RPKG_DESCRIPTION_URL="$rpkg_description_url" \
QUIET_CURL="$quiet_curl" \
LC_ALL="C" \
Rscript --no-save -e "source('@LIBDIR@/R2pkg.R'); main()"
retval=${?}
if [ $retval -ne 0 ]; then
echo "ERROR: making $rpkg package failed." 1>&2
fi
return $retval
}
edit_Makefile ()
{
if [ $use_editor = yes ] && [ -s Makefile ]; then
$PKGEDITOR Makefile
fi
}
edit_DESCR ()
{
if [ $use_editor = yes ] && [ -s DESCR ]; then
$PKGEDITOR DESCR
fi
}
create_distinfo ()
{
echo_verbose1 "==> Fetching R-$rpkg ..."
show_verbose2 "$make" "makesum" || return $?
show_verbose2 "$make" "makepatchsum" || return $?
return 0
}
create_buildlink3_mk ()
{
if [ -f buildlink3.mk.orig ]; then
PKGVERSION=$($make show-var VARNAME=PKGVERSION)
sed -E -e "/BUILDLINK_API_DEPENDS\./s/[[:digit:].]+$/$PKGVERSION/" \
buildlink3.mk.orig > buildlink3.mk
fi
}
extract ()
{
echo_verbose0 "[ $level ] Extracting R-$rpkg ..."
show_verbose2 env SKIP_DEPENDS=yes "$make" clean extract
}
check_license ()
{
rm -f LICENSE
# echo '===> LICENSE files:'
if exists work/*/LICENSE; then
grep -v "^YEAR: " work/*/LICENSE \
| grep -v "^COPYRIGHT HOLDER: " \
| grep -v "^ORGANIZATION: " \
> LICENSE
if [ -s LICENSE ]; then
# ninka -d LICENSE
cp work/*/LICENSE .
printf '%s' "[ $level ] Current license: "
grep LICENSE Makefile
echo "[ $level ] Please check it against the following:"
cat LICENSE
else
rm LICENSE
sed -E -e 's/[[:blank:]]+#[[:blank:]]+\+ file LICENSE[[:blank:]]+.*$//' Makefile > Makefile.$pid \
&& mv Makefile.$pid Makefile
grep -q "file LICENSE" Makefile && echo "[ $level ] 'file LICENSE' in Makefile but no relevant license information"
fi
fi
}
check_copying ()
{
exists work/*/COPYING && cp work/*/COPYING .
exists work/*/COPYING.lib && cp work/*/COPYING.lib .
}
cleanup_DESCR ()
{
if [ -f DESCR ] && [ -f DESCR.orig ]; then
if diff --ignore-case --ignore-all-space --ignore-blank-lines DESCR.orig DESCR > /dev/null; then
mv DESCR.orig DESCR
else
mv DESCR DESCR.new
mv DESCR.orig DESCR
fi
elif [ -f DESCR.orig ]; then
mv DESCR.orig DESCR
fi
}
cleanup_Makefile ()
{
if [ -f Makefile ] && [ -f Makefile.orig ]; then
diff --ignore-case --ignore-all-space --ignore-blank-lines Makefile.orig Makefile > /dev/null \
&& mv Makefile.orig Makefile
elif [ -f Makefile.orig ]; then
mv Makefile.orig Makefile
fi
}
cleanup_buildlink3 ()
{
if [ -f buildlink3.mk ] && [ -f buildlink3.mk.orig ]; then
diff --ignore-case --ignore-all-space --ignore-blank-lines buildlink3.mk.orig buildlink3.mk > /dev/null \
&& mv buildlink3.mk.orig buildlink3.mk
elif [ -f buildlink3.mk.orig ]; then
mv buildlink3.mk.orig buildlink3.mk
fi
}
cleanup_distinfo ()
{
if [ -f distinfo ] && [ -f distinfo.orig ]; then
tail +2 distinfo.orig > $TMPDIR/distinfo.orig.$pid
tail +2 distinfo > $TMPDIR/distinfo.$pid
cmp -s $TMPDIR/distinfo.orig.$pid $TMPDIR/distinfo.$pid \
&& mv distinfo.orig distinfo
rm -f $TMPDIR/distinfo.orig.$pid $TMPDIR/distinfo.$pid
elif [ -f distinfo.orig ]; then
mv distinfo.orig distinfo
fi
}
cleanup_misc_files ()
{
[ "$keep_description" = "yes" ] || rm -f DESCRIPTION
[ $level -eq 0 ] && rm -f "$packages_list"
[ $level -eq 0 ] && rm -f "$dependency_list"
}
cleanup ()
{
cleanup_DESCR
cleanup_Makefile
cleanup_buildlink3
cleanup_distinfo
cleanup_misc_files
}
messages ()
{
if [ $quiet = false ] && [ $level -eq 0 ]; then
cat << EOF
Please do not forget the following:
- check DESCR and edit as necessary.
- check Makefile:
o verify the COMMENT.
o verify the LICENSE.
o verify the DEPENDS, especially the categories.
EOF
[ -f buildlink3.mk ] && echo "- check buildlink3.mk"
[ "$keep_description" = "yes" ] && echo "- remove DESCRIPTION."
if [ $recursive = true ]; then
cat << EOF
Recursive packages may have been created in ../../wip; please do the following:
- edit each Makefile as follows (in addition to following the notes above):
o move recursively created packages to the appropriate category.
o fix the category in Makefile.
o fix the category of any dependencies.
o remove any extraneous dependencies.
EOF
if [ -s "$dependency_list" ]; then
tsort "$dependency_list" > depends
echo "- It may be useful to test these packages in the following order:"
awk 'BEGIN{printf(" ")} {printf(" R-%s",$0)}' depends && echo
fi
fi
fi
}
echo_verbose0 "$banner_msg ..."
check_for_R
check_for_no_recursion
preserve_original_content
make_package
error=${?}
if [ $error -eq 0 ]; then
edit_Makefile
error=${?}; [ $error -eq 0 ] || exit $error
edit_DESCR
error=${?}; [ $error -eq 0 ] || exit $error
create_distinfo
create_buildlink3_mk
extract
check_license
check_copying
fi
messages
cleanup
if [ $error -eq 0 ]; then
echo_verbose1 "$banner_msg: completed successfully"
else
echo_verbose1 "$banner_msg: FAILED"
fi
exit $error
|