summaryrefslogtreecommitdiff
path: root/biology
AgeCommit message (Expand)AuthorFilesLines
2020-01-11chemtool: Mark as PaX mprotect unsafe to prevent segfaultryoon1-2/+5
2019-12-21Don't hardcode libgomp, but use -fopenmp for linking. Fixes clang withjoerg2-1/+15
2019-11-20gnome-chemistry-utils: Revbump for openbabel 3.0.0nb1kamil1-2/+2
2019-11-20openbabel: Fix pkg-config .pc filekamil4-4/+21
2019-11-20openbabel: Upgrade to 3.0.0kamil12-198/+199
2019-11-02biology: align variable assignmentsrillig10-33/+33
2019-10-01py-pydicom: Update to 1.3.0nia3-138/+150
2019-09-02Changed PYTHON_VERSIONS_INCOMPATIBLE to PYTHON_VERSIONS_ACCEPTED; needed for ...adam1-2/+2
2019-08-30Switch packages using GLUT to FreeGLUT.nia2-6/+6
2019-08-22Recursive revbump from boost-1.71.0ryoon2-4/+4
2019-08-14Add the biopython license to DEFAULT_ACCEPTABLE_LICENSES.brook1-2/+2
2019-08-11Bump PKGREVISIONs for perl 5.30.0wiz16-32/+32
2019-08-09py-biopython: initial commitbrook5-1/+1301
2019-07-21*: recursive bump for gdk-pixbuf2-2.38.1wiz4-8/+8
2019-07-20*: recursive bump for nettle 3.5.1wiz2-4/+4
2019-07-01Recursive revbump from boost-1.70.0ryoon2-3/+4
2019-06-30Update packages using a search.cpan.org HOMEPAGE to metacpan.org.nia1-2/+2
2019-06-28biology/ncbi-blast+: Unbreak configurebacon1-3/+4
2019-06-24More http -> https.nia1-2/+2
2019-05-29Revbump after updating graphics/glewadam1-2/+2
2019-05-11biology/vsearch: Upgrade to 2.13.4bacon7-99/+10
2019-05-10Add vsearchbacon1-1/+2
2019-05-10biology/vsearch: import vsearch-2.13.3bacon8-0/+173
2019-05-04Add fastpbacon1-1/+2
2019-05-04biology/fastp: import fastp-0.20.0bacon5-0/+83
2019-05-01biology/kallisto: Switch from archivers/szip to archivers/libaecbacon1-2/+3
2019-04-26fix some whitespace, mostly introduced in the previousmaya1-2/+2
2019-04-26Omit mentions of python 34 and 35, after those were removed.maya1-2/+2
2019-04-25PKGREVISION bump for anything using python without a PYPKGPREFIX.maya5-6/+10
2019-04-06biology/chemtool: Fix build on CentOS and NetBSDbacon1-2/+6
2019-04-03Recursive revbump from textproc/icuryoon1-1/+2
2019-03-27biology/samtools: Add zlib dependency for Linuxbacon1-1/+2
2019-03-27biology/bcftools: Add zlib dependency for Linuxbacon1-2/+3
2019-01-15Add hisat2bacon1-1/+2
2019-01-15biology/hisat2: import hisat2-2.1.0.23bacon6-0/+579
2019-01-13Multiple packages: Replace obsolete maintainer emailbacon3-6/+6
2019-01-07ncbi-blast+: Upgrade to 2.8.1bacon6-38/+157
2019-01-07Add canubacon1-1/+2
2019-01-07biology/canu: import canu-1.8bacon8-0/+356
2018-12-22Add stacksbacon1-1/+2
2018-12-22biology/stacks: import stacks-2.2bacon4-0/+102
2018-12-21Add kallistobacon1-1/+2
2018-12-21biology/kallisto: import kallisto-0.45.0bacon7-0/+163
2018-12-13revbump for boost 1.69.0adam1-1/+2
2018-12-09revbump after updating textproc/icuadam1-2/+2
2018-12-05py-pydicom: Update to 1.2.1.bsiegert2-7/+7
2018-11-15bcftools: added version 1.9adam5-1/+84
2018-11-14Revbump after cairo 1.16.0 update.kleink4-8/+8
2018-11-12Recursive revbump from hardbuzz-2.1.1ryoon4-8/+8
2018-11-06samtools: updated to 1.9adam2-18/+19
generated by cgit v1.2.3 (git 2.39.1) at 2024-11-08 18:32:53 +0000