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2019-06-30Update packages using a search.cpan.org HOMEPAGE to metacpan.org.nia1-2/+2
2019-06-28biology/ncbi-blast+: Unbreak configurebacon1-3/+4
2019-06-24More http -> https.nia1-2/+2
2019-05-29Revbump after updating graphics/glewadam1-2/+2
2019-05-11biology/vsearch: Upgrade to 2.13.4bacon7-99/+10
2019-05-10Add vsearchbacon1-1/+2
2019-05-10biology/vsearch: import vsearch-2.13.3bacon8-0/+173
2019-05-04Add fastpbacon1-1/+2
2019-05-04biology/fastp: import fastp-0.20.0bacon5-0/+83
2019-05-01biology/kallisto: Switch from archivers/szip to archivers/libaecbacon1-2/+3
2019-04-26fix some whitespace, mostly introduced in the previousmaya1-2/+2
2019-04-26Omit mentions of python 34 and 35, after those were removed.maya1-2/+2
2019-04-25PKGREVISION bump for anything using python without a PYPKGPREFIX.maya5-6/+10
2019-04-06biology/chemtool: Fix build on CentOS and NetBSDbacon1-2/+6
2019-04-03Recursive revbump from textproc/icuryoon1-1/+2
2019-03-27biology/samtools: Add zlib dependency for Linuxbacon1-1/+2
2019-03-27biology/bcftools: Add zlib dependency for Linuxbacon1-2/+3
2019-01-15Add hisat2bacon1-1/+2
2019-01-15biology/hisat2: import hisat2-2.1.0.23bacon6-0/+579
2019-01-13Multiple packages: Replace obsolete maintainer emailbacon3-6/+6
2019-01-07ncbi-blast+: Upgrade to 2.8.1bacon6-38/+157
2019-01-07Add canubacon1-1/+2
2019-01-07biology/canu: import canu-1.8bacon8-0/+356
2018-12-22Add stacksbacon1-1/+2
2018-12-22biology/stacks: import stacks-2.2bacon4-0/+102
2018-12-21Add kallistobacon1-1/+2
2018-12-21biology/kallisto: import kallisto-0.45.0bacon7-0/+163
2018-12-13revbump for boost 1.69.0adam1-1/+2
2018-12-09revbump after updating textproc/icuadam1-2/+2
2018-12-05py-pydicom: Update to 1.2.1.bsiegert2-7/+7
2018-11-15bcftools: added version 1.9adam5-1/+84
2018-11-14Revbump after cairo 1.16.0 update.kleink4-8/+8
2018-11-12Recursive revbump from hardbuzz-2.1.1ryoon4-8/+8
2018-11-06samtools: updated to 1.9adam2-18/+19
2018-11-06htslib: updated to 1.9adam2-22/+17
2018-10-31biology: +py-pydicomleot1-1/+2
2018-10-31py-pydicom: Import py-pydicom-1.2.0 as biology/py-pydicomleot4-0/+465
2018-09-29xylem: build fixtnn2-1/+16
2018-08-22Recursive bump for perl5-5.28.0wiz11-18/+22
2018-08-04biology/plinkseq: Requires c++11 to build with protobuf-3.6.0minskim1-3/+3
2018-07-25Add trimmomaticbacon1-1/+2
2018-07-25biology/trimmomatic: import Trimmomatic-0.38bacon4-0/+47
2018-07-20Recursive revbump from textproc/icu-62.1ryoon1-2/+2
2018-07-18Mark packages that require C++03 (or the GNU variants) if they fail withjoerg2-4/+4
2018-07-04*: Move SUBST_STAGE from post-patch to pre-configurejperkin3-7/+7
2018-07-03extend PYTHON_VERSIONS_ for Python 3.7adam1-2/+2
2018-05-22biology/ncbi-blast+: Respect env to support PKGSRC_USE_RELRObacon3-8/+9
2018-05-07Add samtoolsbacon1-1/+2
2018-05-07biology/samtools: import samtools-1.8bacon4-0/+58
2018-05-01biology/htslib: Fix category in bl3bacon1-2/+2
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