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2022-11-28Add balance-tuipin1-1/+2
2022-11-28biology/balance-tui: import packagepin5-0/+412
2022-11-23massive revision bump after textproc/icu updateadam7-13/+14
2022-11-16py-cutadapt: fix build with python 3.11wiz1-1/+8
2022-11-15py-pydicom: updated to 2.3.1adam2-6/+6
2022-11-14py-dnaio: update to 0.9.1.wiz3-11/+21
2022-11-08py-pydicom: updated to 2.3.0adam3-66/+60
2022-11-06biology/Makefile: Add gffreadbacon1-1/+2
2022-11-06biology/gffread: GFF/GTF format conversions, filtering, etcbacon5-0/+110
2022-11-06biology/Makefile: Add fastq-trimbacon1-1/+2
2022-11-06biology/fastq-trim: Lightening fast sequence read trimmerbacon4-0/+107
2022-10-26*: bump PKGREVISION for libunistring shlib major bumpwiz2-3/+4
2022-10-18biology/molsketch: update to 0.7.3pin2-7/+6
2022-08-11Bump all dependent packages of wayland (belatedly)gutteridge2-4/+4
2022-07-25*: remove pkg-config from tools where no buildlink3.mk file is includedwiz1-2/+1
2022-07-05htslib: updated to 1.15.1adam2-8/+7
2022-06-30*: Revbump packages that use Python at runtime without a PKGNAME prefixnia9-15/+18
2022-06-28*: recursive bump for perl 5.36wiz22-34/+44
2022-06-11biology/peak-classifier: Update to 0.1.4bacon3-7/+7
2022-06-11biology/vcf2hap: Update to 0.1.6bacon3-7/+7
2022-06-11biology/ad2vcf: Update to 0.1.6bacon3-7/+7
2022-06-11biology/vcf-split: Update to 0.1.5bacon3-7/+7
2022-06-11biology/biolibc-tools: Update to 0.1.3bacon3-7/+9
2022-06-11biology/biolibc: Update to 0.2.3bacon4-15/+62
2022-04-25stacks: needs -lsocket on SunOStnn1-1/+3
2022-04-25stacks: avoid ambiguous math functionstnn7-1/+100
2022-04-18revbump for textproc/icu updateadam7-13/+14
2022-04-10biology/ncbi-blast+: Update to 2.13.0bacon6-51/+276
2022-04-05biology/Makefile: Add fastx-toolkitbacon1-1/+2
2022-04-05biology/fastx-toolkit: CLI tools for FASTA/FASTQ files preprocessingbacon7-0/+109
2022-04-03revbump for devel/protobufadam1-2/+2
2022-03-17biology/stacks: Update to 2.60bacon3-63/+35
2022-03-17biology/hisat2: Update to 2.2.1bacon7-482/+198
2022-03-16biology/ncbi-blast+: Disable MKPIEbacon1-1/+2
2022-03-15biology/vcf2hap: Update to 0.1.5bacon3-7/+7
2022-03-15biology/vcf-split: Update to 0.1.4bacon3-8/+7
2022-03-15biology/peak-classifier: Update to 0.1.3bacon3-7/+7
2022-03-15biology/biolibc-tools: Update to 0.1.2bacon3-7/+11
2022-03-15biology/ad2vcf: Update to 0.1.5bacon3-7/+7
2022-03-15biology/biolibc: Update to 0.2.2bacon4-21/+113
2022-03-13(biology/minimap2) Updated 2.18 to 2.24mef2-12/+8
2022-02-27biology/kallisto: Update to 0.48.0bacon6-8/+81
2022-02-26biology/bcftools: Update to 1.15bacon4-8/+8
2022-02-26biology/samtools: Update to 1.15bacon4-8/+10
2022-02-26biology/htslib: Update to 1.15bacon4-8/+8
2022-02-17py-biopython: update to 1.79.wiz3-105/+115
2022-02-17py-mol: removewiz5-1028/+1
2022-01-17py-cutadapt: updated to 3.5adam3-10/+17
2022-01-11biology/molsketch: fix broken buildpin1-2/+2
2022-01-10py-mol: convert to egg.mkwiz2-5/+4
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