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path:
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biology
Age
Commit message (
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Author
Files
Lines
2019-01-07
ncbi-blast+: Upgrade to 2.8.1
bacon
6
-38
/
+157
2019-01-07
Add canu
bacon
1
-1
/
+2
2019-01-07
biology/canu: import canu-1.8
bacon
8
-0
/
+356
2018-12-22
Add stacks
bacon
1
-1
/
+2
2018-12-22
biology/stacks: import stacks-2.2
bacon
4
-0
/
+102
2018-12-21
Add kallisto
bacon
1
-1
/
+2
2018-12-21
biology/kallisto: import kallisto-0.45.0
bacon
7
-0
/
+163
2018-12-13
revbump for boost 1.69.0
adam
1
-1
/
+2
2018-12-09
revbump after updating textproc/icu
adam
1
-2
/
+2
2018-12-05
py-pydicom: Update to 1.2.1.
bsiegert
2
-7
/
+7
2018-11-15
bcftools: added version 1.9
adam
5
-1
/
+84
2018-11-14
Revbump after cairo 1.16.0 update.
kleink
4
-8
/
+8
2018-11-12
Recursive revbump from hardbuzz-2.1.1
ryoon
4
-8
/
+8
2018-11-06
samtools: updated to 1.9
adam
2
-18
/
+19
2018-11-06
htslib: updated to 1.9
adam
2
-22
/
+17
2018-10-31
biology: +py-pydicom
leot
1
-1
/
+2
2018-10-31
py-pydicom: Import py-pydicom-1.2.0 as biology/py-pydicom
leot
4
-0
/
+465
2018-09-29
xylem: build fix
tnn
2
-1
/
+16
2018-08-22
Recursive bump for perl5-5.28.0
wiz
11
-18
/
+22
2018-08-04
biology/plinkseq: Requires c++11 to build with protobuf-3.6.0
minskim
1
-3
/
+3
2018-07-25
Add trimmomatic
bacon
1
-1
/
+2
2018-07-25
biology/trimmomatic: import Trimmomatic-0.38
bacon
4
-0
/
+47
2018-07-20
Recursive revbump from textproc/icu-62.1
ryoon
1
-2
/
+2
2018-07-18
Mark packages that require C++03 (or the GNU variants) if they fail with
joerg
2
-4
/
+4
2018-07-04
*: Move SUBST_STAGE from post-patch to pre-configure
jperkin
3
-7
/
+7
2018-07-03
extend PYTHON_VERSIONS_ for Python 3.7
adam
1
-2
/
+2
2018-05-22
biology/ncbi-blast+: Respect env to support PKGSRC_USE_RELRO
bacon
3
-8
/
+9
2018-05-07
Add samtools
bacon
1
-1
/
+2
2018-05-07
biology/samtools: import samtools-1.8
bacon
4
-0
/
+58
2018-05-01
biology/htslib: Fix category in bl3
bacon
1
-2
/
+2
2018-04-30
Add htslib
bacon
1
-1
/
+2
2018-04-30
biology/htslib: import htslib-1.8
bacon
5
-0
/
+94
2018-04-29
ncbi-blast+: removed references to wip
adam
1
-2
/
+2
2018-04-27
Add ncbi-blast+
bacon
1
-1
/
+2
2018-04-27
biology/ncbi-blast+: import ncbi-blast+-2.7.1
bacon
11
-0
/
+4348
2018-04-16
Recursive bump for new fribidi dependency in pango.
wiz
4
-8
/
+8
2018-03-12
Recursive bumps for fontconfig and libzip dependency changes.
wiz
4
-8
/
+8
2018-02-11
plinkseq: use https
wiz
1
-3
/
+3
2018-01-17
Belated PKGREVISION bump for devel/protobuf update.
jperkin
1
-2
/
+2
2018-01-07
Fix indentation in buildlink3.mk files.
rillig
1
-2
/
+2
2018-01-01
Sort PLIST files.
rillig
3
-6
/
+6
2018-01-01
Replaced $(ROUND) with ${CURLY} variable references.
rillig
1
-1
/
+1
2018-01-01
Cleanup: replace curly braces with parentheses.
rillig
3
-15
/
+15
2017-12-27
Re-add patch to bring timeval definition and select prototype into scope.
he
3
-2
/
+19
2017-12-24
chemical-mime-data: comment out dead sites
wiz
1
-4
/
+3
2017-12-17
biology/bwa: Update to 0.7.17
bacon
4
-34
/
+39
2017-10-03
transfig: remove, replaced by print/fig2dev
wiz
1
-2
/
+2
2017-09-17
p5-Bio-ASN1-EntrezGene: update to 1.72.
wiz
2
-8
/
+10
2017-09-17
bioperl: update to 1.007002.
wiz
2
-7
/
+9
2017-09-04
Comment out dead sites.
wiz
1
-2
/
+2
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